RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 UGGT1Q9NYU2 1555 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 OAS2P29728 719 aaKnown RBP17.72■□□□□ 0.43
SRPK1-201ENST00000346162 HSPA4P34932 840 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 KLHL10Q6JEL2 608 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 ZHX3Q9H4I2 956 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 TMEM2Q9UHN6 1383 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 YEATS2Q9ULM3 1422 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 ZNF287Q9HBT7 754 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.72■□□□□ 0.43
SRPK1-201ENST00000346162 PAG1Q9NWQ8 432 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 ATP2C2O75185 946 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 LRCH2Q5VUJ6 765 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 ZNF215Q9UL58 517 aaPredicted RBP17.72■□□□□ 0.43
SRPK1-201ENST00000346162 KIAA0232Q92628 1395 aa17.72■□□□□ 0.43
SRPK1-201ENST00000346162 SSBP05455 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
SRPK1-201ENST00000346162 MFSD6Q6ZSS7 791 aa17.71■□□□□ 0.43
SRPK1-201ENST00000346162 TFCP2Q12800 502 aa17.71■□□□□ 0.43
SRPK1-201ENST00000346162 ZNF790Q6PG37 636 aa17.71■□□□□ 0.43
SRPK1-201ENST00000346162 ORAI2Q96SN7 254 aa17.71■□□□□ 0.43
SRPK1-201ENST00000346162 ANKIB1Q9P2G1 1089 aa17.71■□□□□ 0.43
SRPK1-201ENST00000346162 MYOM2P54296 1465 aa17.71■□□□□ 0.43
SRPK1-201ENST00000346162 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.42
SRPK1-201ENST00000346162 NBPF7P0C2Y1 421 aaPredicted RBP17.7■□□□□ 0.42
SRPK1-201ENST00000346162 RBM5P52756 815 aaKnown RBP eCLIP17.7■□□□□ 0.42
SRPK1-201ENST00000346162 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
SRPK1-201ENST00000346162 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
SRPK1-201ENST00000346162 BMP2KQ9NSY1 1161 aaPredicted RBP17.7■□□□□ 0.42
SRPK1-201ENST00000346162 CPA1P15085 419 aa17.7■□□□□ 0.42
SRPK1-201ENST00000346162 LTKP29376 864 aa17.7■□□□□ 0.42
SRPK1-201ENST00000346162 TANGO6Q9C0B7 1094 aa17.7■□□□□ 0.42
SRPK1-201ENST00000346162 TERF2Q15554 542 aa17.7■□□□□ 0.42
SRPK1-201ENST00000346162 CPLX3Q8WVH0 158 aa17.7■□□□□ 0.42
SRPK1-201ENST00000346162 KAT6BQ8WYB5 2073 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 SYNMO15061 1565 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 RAD50Q92878 1312 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 IL2RBP14784 551 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 JRKLQ9Y4A0 524 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
SRPK1-201ENST00000346162 SYT1P21579 422 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 RPAINQ86UA6 219 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 HNRNPH2P55795 449 aaKnown RBP17.69■□□□□ 0.42
SRPK1-201ENST00000346162 SLC9C2Q5TAH2 1124 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
SRPK1-201ENST00000346162 NEBLO76041 1014 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 RUFY3Q7L099 469 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 PREX2Q70Z35 1606 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 HDXQ7Z353 690 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 ATRIPQ8WXE1 791 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 CTAGE15A4D2H0 777 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 CTAGE8P0CG41 777 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 CTAGE6Q86UF2 777 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 CTAGE4Q8IX94 777 aa17.68■□□□□ 0.42
SRPK1-201ENST00000346162 ZNF444Q8N0Y2 327 aaPredicted RBP17.68■□□□□ 0.42
SRPK1-201ENST00000346162 SMC1AQ14683 1233 aaKnown RBP17.68■□□□□ 0.42
SRPK1-201ENST00000346162 INPP5BP32019 993 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 PRDM15P57071 1507 aaPredicted RBP17.67■□□□□ 0.42
SRPK1-201ENST00000346162 CLNS1AP54105 237 aaKnown RBP17.67■□□□□ 0.42
SRPK1-201ENST00000346162 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
SRPK1-201ENST00000346162 ERCC6LQ2NKX8 1250 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 ARHGEF10O15013 1369 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 SGSM2O43147 1006 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 ZBTB43O43298 467 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 NLRP5P59047 1200 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 E2F4Q16254 413 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 CCDC152Q4G0S7 254 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 PRDM4Q9UKN5 801 aa17.67■□□□□ 0.42
SRPK1-201ENST00000346162 AOX1Q06278 1338 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 PPP2R3AQ06190 1150 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 NGLY1Q96IV0 654 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 PAIP2Q9BPZ3 127 aaKnown RBP17.66■□□□□ 0.42
SRPK1-201ENST00000346162 RSRC1Q96IZ7 334 aaKnown RBP17.66■□□□□ 0.42
SRPK1-201ENST00000346162 CARD6Q9BX69 1037 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 TUBB4BP68371 445 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 KLHDC4Q8TBB5 520 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 SEC63Q9UGP8 760 aaKnown RBP17.66■□□□□ 0.42
SRPK1-201ENST00000346162 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
SRPK1-201ENST00000346162 RNF113AO15541 343 aaKnown RBP17.66■□□□□ 0.42
SRPK1-201ENST00000346162 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
SRPK1-201ENST00000346162 MAP2K1Q02750 393 aaPredicted RBP17.66■□□□□ 0.42
SRPK1-201ENST00000346162 ICE2Q659A1 982 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 CCDC114Q96M63 670 aa17.66■□□□□ 0.42
SRPK1-201ENST00000346162 MPHOSPH10O00566 681 aaKnown RBP17.65■□□□□ 0.42
SRPK1-201ENST00000346162 ISM2Q6H9L7 571 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 DHX32Q7L7V1 743 aaKnown RBP17.65■□□□□ 0.42
SRPK1-201ENST00000346162 IL17REQ8NFR9 667 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 ALG1Q9BT22 464 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
SRPK1-201ENST00000346162 CCDC175P0C221 793 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
SRPK1-201ENST00000346162 AOPEPQ8N6M6 819 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 RTL1A6NKG5 1358 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 CCDC194A0A1B0GVG4 234 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms