RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 UBA7P41226 1012 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 RRAGBQ5VZM2 374 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 DRC1Q96MC2 740 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 STX8Q9UNK0 236 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 SAMD9Q5K651 1589 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 A0A1B0GUL7 405 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 SHTN1A0MZ66 631 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 C6orf229H3BNL8 230 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 MATR3P43243 847 aaKnown RBP eCLIP9.23□□□□□ -0.936e-7■■□□□ 14.3
UBE4B-202ENST00000343090 ERO1AQ96HE7 468 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 GBP3Q9H0R5 595 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 GSPT1P15170 499 aaKnown RBP9.23□□□□□ -0.93
UBE4B-202ENST00000343090 CCDC178Q5BJE1 867 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 GPT2Q8TD30 523 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 RPGRQ92834 1020 aaKnown RBP9.23□□□□□ -0.93
UBE4B-202ENST00000343090 FAM107BQ9H098 131 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 GCC2Q8IWJ2 1684 aa9.23□□□□□ -0.93
UBE4B-202ENST00000343090 CAPN2P17655 700 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 PDE4BQ07343 736 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 IFIT1BQ5T764 474 aaKnown RBP9.22□□□□□ -0.93
UBE4B-202ENST00000343090 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-202ENST00000343090 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
UBE4B-202ENST00000343090 DHX58Q96C10 678 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 CHAMP1Q96JM3 812 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 PHF23Q9BUL5 403 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-202ENST00000343090 TCP11L1Q9NUJ3 509 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 A0A1B0GVL5 298 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 SLC27A2O14975 620 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 ZKSCAN3Q9BRR0 538 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 NCOA5Q9HCD5 579 aaKnown RBP9.22□□□□□ -0.93
UBE4B-202ENST00000343090 ARFGAP3Q9NP61 516 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 CFAP65Q6ZU64 1925 aaKnown RBP9.22□□□□□ -0.93
UBE4B-202ENST00000343090 KIF5BP33176 963 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 MICALL1Q8N3F8 863 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
UBE4B-202ENST00000343090 PBRM1Q86U86 1689 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 STX17P56962 302 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 CCDC152Q4G0S7 254 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 PLCD4Q9BRC7 762 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 KRT23Q9C075 422 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 IFNKQ9P0W0 207 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 PRDM4Q9UKN5 801 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 NPHP3Q7Z494 1330 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 AEBP2Q6ZN18 517 aaPredicted RBP9.21□□□□□ -0.93
UBE4B-202ENST00000343090 IP6K1Q92551 441 aa9.21□□□□□ -0.93
UBE4B-202ENST00000343090 RPS6KB1P23443 525 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 CCDC40Q4G0X9 1142 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 KANK3Q6NY19 840 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 CADPS2Q86UW7 1296 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 MAGEB6Q8N7X4 407 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 CALML4Q96GE6 196 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 ZNF594Q96JF6 807 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-202ENST00000343090 RAB34Q9BZG1 259 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 ATP7AQ04656 1500 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 ZBTB22O15209 634 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 SGSM2O43147 1006 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 USO1O60763 962 aaKnown RBP9.21□□□□□ -0.94
UBE4B-202ENST00000343090 TCERG1LQ5VWI1 586 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 OTUD7BQ6GQQ9 843 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 CCDC113Q9H0I3 377 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 JADE2Q9NQC1 790 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 JAG2Q9Y219 1238 aa9.21□□□□□ -0.94
UBE4B-202ENST00000343090 EDC4Q6P2E9 1401 aaKnown RBP9.21□□□□□ -0.94
UBE4B-202ENST00000343090 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 PKP1Q13835 747 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 CCDC91Q7Z6B0 441 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 ESR2Q92731 530 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 ABCC2Q92887 1545 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 ZMYM3Q14202 1370 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 MYO1BO43795 1136 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 MCM6Q14566 821 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 SYT10Q6XYQ8 523 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 SUCLG2Q96I99 432 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 CRNKL1Q9BZJ0 848 aaKnown RBP9.2□□□□□ -0.94
UBE4B-202ENST00000343090 DDX21Q9NR30 783 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBE4B-202ENST00000343090 PPP1R12BO60237 982 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-202ENST00000343090 MAP9Q49MG5 647 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 HEATR3Q7Z4Q2 680 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 FAM89AQ96GI7 184 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 NGLY1Q96IV0 654 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 VPS18Q9P253 973 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 BCCIPQ9P287 314 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBE4B-202ENST00000343090 PAFAH1B1P43034 410 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 SEPT7Q16181 437 aaKnown RBP9.2□□□□□ -0.94
UBE4B-202ENST00000343090 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-202ENST00000343090 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 TMOD2Q9NZR1 351 aa9.2□□□□□ -0.94
UBE4B-202ENST00000343090 NIP7Q9Y221 180 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBE4B-202ENST00000343090 STAT6P42226 847 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 TNNI3KQ59H18 835 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 NBPF6Q5VWK0 638 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 NBPF5PQ86XG9 351 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 ANKRD18AQ8IVF6 992 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 NBPF4Q96M43 638 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 FPGT-TNNI3KV9GXZ4 949 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 ABCA5Q8WWZ7 1642 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 IRS4O14654 1257 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms