RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 TPM3P06753 285 aa28.22■■■□□ 2.11
NELFB-201ENST00000343053 ZSCAN25Q6NSZ9 544 aa28.22■■■□□ 2.11
NELFB-201ENST00000343053 ZSCAN16Q9H4T2 348 aaPredicted RBP28.22■■■□□ 2.11
NELFB-201ENST00000343053 ME1P48163 572 aa28.21■■■□□ 2.11
NELFB-201ENST00000343053 A0A1B0GUL7 405 aa28.21■■■□□ 2.11
NELFB-201ENST00000343053 GTF2F1P35269 517 aaKnown RBP eCLIP28.21■■■□□ 2.116e-7■■■■■ 34.2
NELFB-201ENST00000343053 CACTINQ8WUQ7 758 aaKnown RBP28.21■■■□□ 2.11
NELFB-201ENST00000343053 MTERF4Q7Z6M4 381 aaKnown RBP28.2■■■□□ 2.11
NELFB-201ENST00000343053 CWC25Q9NXE8 425 aaPredicted RBP28.2■■■□□ 2.11
NELFB-201ENST00000343053 GJB4Q9NTQ9 266 aa28.2■■■□□ 2.1
NELFB-201ENST00000343053 GOLGA6L19H0YKK7 550 aa28.19■■■□□ 2.1
NELFB-201ENST00000343053 C19orf44Q9H6X5 657 aa28.19■■■□□ 2.1
NELFB-201ENST00000343053 ZMYM1Q5SVZ6 1142 aa28.19■■■□□ 2.1
NELFB-201ENST00000343053 ZNF142P52746 1687 aaPredicted RBP28.19■■■□□ 2.1
NELFB-201ENST00000343053 H7C1W4 665 aa28.18■■■□□ 2.1
NELFB-201ENST00000343053 ILDR1Q86SU0 546 aaPredicted RBP28.18■■■□□ 2.1
NELFB-201ENST00000343053 ALS2Q96Q42 1657 aa28.18■■■□□ 2.1
NELFB-201ENST00000343053 FSIP1Q8NA03 581 aa28.18■■■□□ 2.1
NELFB-201ENST00000343053 PALLDQ8WX93 1383 aa28.18■■■□□ 2.1
NELFB-201ENST00000343053 ATF3P18847 181 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 PDIA3P30101 505 aaKnown RBP28.17■■■□□ 2.1
NELFB-201ENST00000343053 ADORA1P30542 326 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 EXOSC10Q01780 885 aaKnown RBP28.17■■■□□ 2.1
NELFB-201ENST00000343053 CCDC73Q6ZRK6 1079 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 OSBP2Q969R2 916 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 RFX7Q2KHR2 1363 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 CBX1P83916 185 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 WASHC4Q2M389 1173 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 PPP4R3BQ5MIZ7 849 aa28.17■■■□□ 2.1
NELFB-201ENST00000343053 CCDC94Q9BW85 323 aaPredicted RBP28.17■■■□□ 2.1
NELFB-201ENST00000343053 IQCB1Q15051 598 aa28.16■■■□□ 2.1
NELFB-201ENST00000343053 PI16Q6UXB8 463 aa28.16■■■□□ 2.1
NELFB-201ENST00000343053 HELLSQ9NRZ9 838 aa28.16■■■□□ 2.1
NELFB-201ENST00000343053 MYH15Q9Y2K3 1946 aa28.16■■■□□ 2.1
NELFB-201ENST00000343053 SNW1Q13573 536 aaKnown RBP28.16■■■□□ 2.1
NELFB-201ENST00000343053 ZNF592Q92610 1267 aa28.16■■■□□ 2.1
NELFB-201ENST00000343053 DSCC1Q9BVC3 393 aa28.16■■■□□ 2.1
NELFB-201ENST00000343053 KINO60870 393 aaKnown RBP28.15■■■□□ 2.1
NELFB-201ENST00000343053 POLR3DP05423 398 aaPredicted RBP28.15■■■□□ 2.1
NELFB-201ENST00000343053 HMGB1P09429 215 aaKnown RBP28.15■■■□□ 2.1
NELFB-201ENST00000343053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.15■■■□□ 2.1
NELFB-201ENST00000343053 KIF1AQ12756 1690 aa28.15■■■□□ 2.1
NELFB-201ENST00000343053 NAA16Q6N069 864 aaPredicted RBP28.15■■■□□ 2.1
NELFB-201ENST00000343053 FILIP1Q7Z7B0 1213 aa28.15■■■□□ 2.1
NELFB-201ENST00000343053 A0A1B0GVL5 298 aa28.15■■■□□ 2.1
NELFB-201ENST00000343053 EYA2O00167 538 aa28.15■■■□□ 2.1
NELFB-201ENST00000343053 RNF113AO15541 343 aaKnown RBP28.15■■■□□ 2.1
NELFB-201ENST00000343053 GORABQ5T7V8 394 aa28.15■■■□□ 2.1
NELFB-201ENST00000343053 LLPHQ9BRT6 129 aaKnown RBP28.15■■■□□ 2.1
NELFB-201ENST00000343053 RCOR1Q9UKL0 485 aa28.15■■■□□ 2.1
NELFB-201ENST00000343053 SPDYE4A6NLX3 237 aa28.14■■■□□ 2.1
NELFB-201ENST00000343053 BECN2A8MW95 431 aa28.14■■■□□ 2.1
NELFB-201ENST00000343053 IL15P40933 162 aaPredicted RBP28.14■■■□□ 2.1
NELFB-201ENST00000343053 CARMIL3Q8ND23 1372 aa28.14■■■□□ 2.1
NELFB-201ENST00000343053 NAA30Q147X3 362 aaPredicted RBP28.14■■■□□ 2.09
NELFB-201ENST00000343053 LMTK3Q96Q04 1460 aa28.13■■■□□ 2.09
NELFB-201ENST00000343053 TNNT1P13805 278 aa28.13■■■□□ 2.09
NELFB-201ENST00000343053 FDPSP14324 419 aaKnown RBP28.13■■■□□ 2.09
NELFB-201ENST00000343053 SCARF1Q14162 830 aa28.13■■■□□ 2.09
NELFB-201ENST00000343053 USP27XA6NNY8 438 aa28.13■■■□□ 2.09
NELFB-201ENST00000343053 STX1AQ16623 288 aa28.13■■■□□ 2.09
NELFB-201ENST00000343053 TPD52L1Q16890 204 aaPredicted RBP28.13■■■□□ 2.09
NELFB-201ENST00000343053 KLHL34Q8N239 644 aa28.13■■■□□ 2.09
NELFB-201ENST00000343053 GLI3P10071 1580 aa28.12■■■□□ 2.09
NELFB-201ENST00000343053 ATP2B3Q16720 1220 aa28.12■■■□□ 2.09
NELFB-201ENST00000343053 AOPEPQ8N6M6 819 aa28.12■■■□□ 2.09
NELFB-201ENST00000343053 SALL1Q9NSC2 1324 aa28.11■■■□□ 2.09
NELFB-201ENST00000343053 COL18A1P39060 1754 aa28.11■■■□□ 2.09
NELFB-201ENST00000343053 PDCL2Q8N4E4 241 aa28.1■■■□□ 2.09
NELFB-201ENST00000343053 PCDHA7Q9UN72 937 aa28.1■■■□□ 2.09
NELFB-201ENST00000343053 CLIC4Q9Y696 253 aa28.1■■■□□ 2.09
NELFB-201ENST00000343053 FAM160A1Q05DH4 1040 aa28.09■■■□□ 2.09
NELFB-201ENST00000343053 TTC39AQ5SRH9 613 aa28.09■■■□□ 2.09
NELFB-201ENST00000343053 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.09■■■□□ 2.09
NELFB-201ENST00000343053 DHX40Q8IX18 779 aaKnown RBP28.09■■■□□ 2.09
NELFB-201ENST00000343053 ZNF396Q96N95 335 aaPredicted RBP28.09■■■□□ 2.09
NELFB-201ENST00000343053 DENND2AQ9ULE3 1009 aa28.09■■■□□ 2.09
NELFB-201ENST00000343053 TJP1Q07157 1748 aa28.09■■■□□ 2.09
NELFB-201ENST00000343053 FOXP2O15409 715 aa28.09■■■□□ 2.09
NELFB-201ENST00000343053 CEP126Q9P2H0 1117 aa28.09■■■□□ 2.09
NELFB-201ENST00000343053 BIN1O00499 593 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 U2AF2P26368 475 aaKnown RBP eCLIP28.08■■■□□ 2.09
NELFB-201ENST00000343053 TOM1L2Q6ZVM7 507 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 SYNE4Q8N205 404 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 ENGASEQ8NFI3 743 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 SDF4Q9BRK5 362 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 AGXT2Q9BYV1 514 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 GOLGA8BA8MQT2 603 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 FAM89AQ96GI7 184 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 TRMT1Q9NXH9 659 aaKnown RBP28.08■■■□□ 2.09
NELFB-201ENST00000343053 TMEM94Q12767 1356 aa28.08■■■□□ 2.09
NELFB-201ENST00000343053 KLF18A0A0U1RQI7 1052 aa28.07■■■□□ 2.08
NELFB-201ENST00000343053 NDUFA8P51970 172 aa28.07■■■□□ 2.08
NELFB-201ENST00000343053 SF3A1Q15459 793 aaKnown RBP28.07■■■□□ 2.08
NELFB-201ENST00000343053 XAGE2Q96GT9 111 aa28.07■■■□□ 2.08
NELFB-201ENST00000343053 PUS7LQ9H0K6 701 aaKnown RBP28.07■■■□□ 2.08
NELFB-201ENST00000343053 MST1RQ04912 1400 aa28.07■■■□□ 2.08
NELFB-201ENST00000343053 ZAP70P43403 619 aa28.06■■■□□ 2.08
NELFB-201ENST00000343053 LRRC8AQ8IWT6 810 aa28.06■■■□□ 2.08
NELFB-201ENST00000343053 LAMB4A4D0S4 1761 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms