RNA–Protein interactions for RNA: ENST00000342022.8

CCDC30-202, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-202ENST00000342022 ZKSCAN1P17029 563 aaPredicted RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 SLC9C2Q5TAH2 1124 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 TNPO1Q92973 898 aaKnown RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 OSBP2Q969R2 916 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 PUS7LQ9H0K6 701 aaKnown RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 TAF1P21675 1872 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 M0R2C6 588 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 DEKP35659 375 aaKnown RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 PARP10Q53GL7 1025 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 VPS37DQ86XT2 251 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 PROM2Q8N271 834 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 NARFQ9UHQ1 456 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 ZNF609O15014 1411 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 CDHR2Q9BYE9 1310 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 SLC27A2O14975 620 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 CIAO1O76071 339 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 NFIXQ14938 502 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 MCMDC2Q4G0Z9 681 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 ANKRD18AQ8IVF6 992 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 CCDC83Q8IWF9 413 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 MIGA1Q8NAN2 632 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 CHMP4CQ96CF2 233 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 NLRP3Q96P20 1036 aa9.35□□□□□ -0.91
CCDC30-202ENST00000342022 PIH1D3Q9NQM4 214 aaKnown RBP9.35□□□□□ -0.91
CCDC30-202ENST00000342022 NUP98P52948 1817 aa9.34□□□□□ -0.91
CCDC30-202ENST00000342022 CYP2E1P05181 493 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-202ENST00000342022 CHAF1AQ13111 956 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-202ENST00000342022 SAMD1Q6SPF0 538 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-202ENST00000342022 TPTE2Q6XPS3 522 aa9.34□□□□□ -0.91
CCDC30-202ENST00000342022 PLA2G12BQ9BX93 195 aa9.34□□□□□ -0.91
CCDC30-202ENST00000342022 N4BP2Q86UW6 1770 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-202ENST00000342022 NCLP19338 710 aaKnown RBP9.34□□□□□ -0.91
CCDC30-202ENST00000342022 RASGRF1Q13972 1273 aa9.34□□□□□ -0.91
CCDC30-202ENST00000342022 TXNRD1Q16881 649 aa9.34□□□□□ -0.91
CCDC30-202ENST00000342022 BCL11BQ9C0K0 894 aaPredicted RBP9.34□□□□□ -0.91
CCDC30-202ENST00000342022 INCENPQ9NQS7 918 aa9.34□□□□□ -0.91
CCDC30-202ENST00000342022 PDRG1Q9NUG6 133 aa9.34□□□□□ -0.91
CCDC30-202ENST00000342022 NUP188Q5SRE5 1749 aa9.34□□□□□ -0.92
CCDC30-202ENST00000342022 CYP21A2P08686 494 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
CCDC30-202ENST00000342022 NECTIN1Q15223 517 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 PUM3Q15397 648 aaKnown RBP9.33□□□□□ -0.92
CCDC30-202ENST00000342022 TJP1Q07157 1748 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 OLFM4Q6UX06 510 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 RUFY3Q7L099 469 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 VGLL2Q8N8G2 317 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 MAP4K1Q92918 833 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 GDPD2Q9HCC8 539 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 HMG20BQ9P0W2 317 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 DENND2AQ9ULE3 1009 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 MAST3O60307 1309 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 RNF113AO15541 343 aaKnown RBP9.33□□□□□ -0.92
CCDC30-202ENST00000342022 HSP90B1P14625 803 aaKnown RBP9.33□□□□□ -0.92
CCDC30-202ENST00000342022 CNBD1Q8NA66 436 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 GPHNQ9NQX3 736 aaPredicted RBP9.33□□□□□ -0.92
CCDC30-202ENST00000342022 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 LRP2BPQ9P2M1 347 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 CYP46A1Q9Y6A2 500 aa9.33□□□□□ -0.92
CCDC30-202ENST00000342022 RIC1Q4ADV7 1423 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 HIP1O00291 1037 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 SLC5A1P13866 664 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 MCTP1Q6DN14 999 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 TXNRD3Q86VQ6 643 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 MAGEB6Q8N7X4 407 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 HSPD1P10809 573 aaKnown RBP9.32□□□□□ -0.92
CCDC30-202ENST00000342022 BLOC1S2Q6QNY1 142 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 CLEC4GQ6UXB4 293 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 LPIN2Q92539 896 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 CDC5LQ99459 802 aaKnown RBP9.32□□□□□ -0.92
CCDC30-202ENST00000342022 TOMM22Q9NS69 142 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 U3KPZ7 1027 aaPredicted RBP9.32□□□□□ -0.92
CCDC30-202ENST00000342022 NWD2Q9ULI1 1742 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 CNTNAP4Q9C0A0 1308 aa9.32□□□□□ -0.92
CCDC30-202ENST00000342022 MCM4P33991 863 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 RPS8P62241 208 aaKnown RBP9.31□□□□□ -0.92
CCDC30-202ENST00000342022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC30-202ENST00000342022 SPATA5Q8NB90 893 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 MINPP1Q9UNW1 487 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 NSFL1CQ9UNZ2 370 aaKnown RBP9.31□□□□□ -0.92
CCDC30-202ENST00000342022 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 COL4A1P02462 1669 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 SMIM22K7EJ46 135 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 GPAA1O43292 621 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 PRKAB2O43741 272 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 ONECUT3O60422 494 aaPredicted RBP9.31□□□□□ -0.92
CCDC30-202ENST00000342022 RXRBP28702 533 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 ZNF827Q17R98 1081 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 STOX1Q6ZVD7 989 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 DDX11Q96FC9 970 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 RAI14Q9P0K7 980 aa9.31□□□□□ -0.92
CCDC30-202ENST00000342022 RBM6P78332 1123 aaKnown RBP9.3□□□□□ -0.92
CCDC30-202ENST00000342022 CCT2P78371 535 aaKnown RBP9.3□□□□□ -0.92
CCDC30-202ENST00000342022 RNF20Q5VTR2 975 aa9.3□□□□□ -0.92
CCDC30-202ENST00000342022 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
CCDC30-202ENST00000342022 FERMT3Q86UX7 667 aa9.3□□□□□ -0.92
CCDC30-202ENST00000342022 ARMT1Q9H993 441 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms