RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 SKILP12757 684 aa15.65■□□□□ 0.1
TMEM248-201ENST00000341567 IQCA1Q86XH1 822 aa15.65■□□□□ 0.1
TMEM248-201ENST00000341567 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
TMEM248-201ENST00000341567 PATL2C9JE40 543 aaKnown RBP15.64■□□□□ 0.09
TMEM248-201ENST00000341567 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
TMEM248-201ENST00000341567 PRDM1O75626 825 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 TYRO3Q06418 890 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 RASEFQ8IZ41 740 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 CAGE1Q8TC20 777 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 GPT2Q8TD30 523 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 UTP14AQ9BVJ6 771 aaKnown RBP15.64■□□□□ 0.09
TMEM248-201ENST00000341567 HMG20BQ9P0W2 317 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 VWDEQ8N2E2 1590 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 CEP152O94986 1710 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 TSPY2A6NKD2 308 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 SLC27A2O14975 620 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 TOM1O60784 492 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 RUFY3Q7L099 469 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 CCAR1Q8IX12 1150 aaKnown RBP15.64■□□□□ 0.09
TMEM248-201ENST00000341567 XAGE2Q96GT9 111 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 HOXB7P09629 217 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 U2AF2P26368 475 aaKnown RBP eCLIP15.64■□□□□ 0.092e-8■■□□□ 13.4
TMEM248-201ENST00000341567 NLRP3Q96P20 1036 aa15.64■□□□□ 0.09
TMEM248-201ENST00000341567 LMTK3Q96Q04 1460 aa15.63■□□□□ 0.09
TMEM248-201ENST00000341567 RNF113AO15541 343 aaKnown RBP15.63■□□□□ 0.09
TMEM248-201ENST00000341567 AXDND1Q5T1B0 1012 aaPredicted RBP15.63■□□□□ 0.09
TMEM248-201ENST00000341567 PPRC1Q5VV67 1664 aaKnown RBP15.63■□□□□ 0.09
TMEM248-201ENST00000341567 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
TMEM248-201ENST00000341567 JAK2O60674 1132 aa15.63■□□□□ 0.09
TMEM248-201ENST00000341567 CTCFLQ8NI51 663 aaPredicted RBP15.63■□□□□ 0.09
TMEM248-201ENST00000341567 CDK5RAP3Q96JB5 506 aa15.63■□□□□ 0.09
TMEM248-201ENST00000341567 GNPATO15228 680 aa15.63■□□□□ 0.09
TMEM248-201ENST00000341567 LEKR1Q6ZMV7 388 aa15.63■□□□□ 0.09
TMEM248-201ENST00000341567 MYL10Q9BUA6 226 aa15.63■□□□□ 0.09
TMEM248-201ENST00000341567 ZNF335Q9H4Z2 1342 aaPredicted RBP15.63■□□□□ 0.09
TMEM248-201ENST00000341567 ZAP70P43403 619 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 PPP1R9BQ96SB3 815 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 ERBB3P21860 1342 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 CPLX3Q8WVH0 158 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 SLFNL1Q499Z3 407 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 PPFIBP1Q86W92 1011 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 ZNF444Q8N0Y2 327 aaPredicted RBP15.62■□□□□ 0.09
TMEM248-201ENST00000341567 ZNF622Q969S3 477 aaKnown RBP eCLIP15.62■□□□□ 0.09
TMEM248-201ENST00000341567 MROH1Q8NDA8 1641 aa15.62■□□□□ 0.09
TMEM248-201ENST00000341567 RIOK3O14730 519 aaKnown RBP15.61■□□□□ 0.09
TMEM248-201ENST00000341567 TXLNAP40222 546 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 ALG1Q9BT22 464 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 CWC15Q9P013 229 aaKnown RBP15.61■□□□□ 0.09
TMEM248-201ENST00000341567 B4E1Z4 1266 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 ZBTB43O43298 467 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 FAM193AP78312 1265 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 ADCK5Q3MIX3 580 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 CCDC102AQ96A19 550 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 MADDQ8WXG6 1647 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 PTPDC1A2A3K4 754 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 CCP110O43303 1012 aa15.61■□□□□ 0.09
TMEM248-201ENST00000341567 SSRP1Q08945 709 aaKnown RBP15.61■□□□□ 0.09
TMEM248-201ENST00000341567 TTF1Q15361 905 aaPredicted RBP15.61■□□□□ 0.09
TMEM248-201ENST00000341567 CCDC43Q96MW1 224 aaKnown RBP15.61■□□□□ 0.09
TMEM248-201ENST00000341567 MBD4O95243 580 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 SNW1Q13573 536 aaKnown RBP15.6■□□□□ 0.09
TMEM248-201ENST00000341567 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 RUFY1Q96T51 708 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 ATP7BP35670 1465 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 RAD50Q92878 1312 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 ERCC4Q92889 916 aaPredicted RBP15.6■□□□□ 0.09
TMEM248-201ENST00000341567 AGLP35573 1532 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 ARHGEF40Q8TER5 1519 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 PI16Q6UXB8 463 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 INTS4Q96HW7 963 aaKnown RBP15.6■□□□□ 0.09
TMEM248-201ENST00000341567 ACBD3Q9H3P7 528 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 BABAM1Q9NWV8 329 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 TFCP2L1Q9NZI6 479 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 KRT18P05783 430 aaKnown RBP15.6■□□□□ 0.09
TMEM248-201ENST00000341567 NLRP5P59047 1200 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 FILIP1LQ4L180 1135 aa15.6■□□□□ 0.09
TMEM248-201ENST00000341567 DHX32Q7L7V1 743 aaKnown RBP15.6■□□□□ 0.09
TMEM248-201ENST00000341567 SNAP23O00161 211 aa15.59■□□□□ 0.09
TMEM248-201ENST00000341567 NAA16Q6N069 864 aaPredicted RBP15.59■□□□□ 0.09
TMEM248-201ENST00000341567 ARMT1Q9H993 441 aa15.59■□□□□ 0.09
TMEM248-201ENST00000341567 hCG_1642624A0A1W2PR95 340 aa15.59■□□□□ 0.09
TMEM248-201ENST00000341567 CYP27B1O15528 508 aa15.59■□□□□ 0.09
TMEM248-201ENST00000341567 WTAPQ15007 396 aa15.59■□□□□ 0.09
TMEM248-201ENST00000341567 CNNM3Q8NE01 707 aa15.59■□□□□ 0.09
TMEM248-201ENST00000341567 SH3TC1Q8TE82 1336 aa15.59■□□□□ 0.09
TMEM248-201ENST00000341567 H0YHG0 523 aa15.58■□□□□ 0.09
TMEM248-201ENST00000341567 RIMBP2O15034 1052 aa15.58■□□□□ 0.09
TMEM248-201ENST00000341567 UQCRFS1P1P0C7P4 283 aa15.58■□□□□ 0.09
TMEM248-201ENST00000341567 TOP1P11387 765 aaKnown RBP15.58■□□□□ 0.09
TMEM248-201ENST00000341567 NOM1Q5C9Z4 860 aaKnown RBP15.58■□□□□ 0.09
TMEM248-201ENST00000341567 CRACR2BQ8N4Y2 399 aaPredicted RBP15.58■□□□□ 0.09
TMEM248-201ENST00000341567 STX1AQ16623 288 aa15.58■□□□□ 0.08
TMEM248-201ENST00000341567 CATIPQ7Z7H3 387 aa15.58■□□□□ 0.08
TMEM248-201ENST00000341567 SYNE4Q8N205 404 aa15.58■□□□□ 0.08
TMEM248-201ENST00000341567 AOPEPQ8N6M6 819 aa15.58■□□□□ 0.08
TMEM248-201ENST00000341567 DBNLQ9UJU6 430 aaKnown RBP15.58■□□□□ 0.08
TMEM248-201ENST00000341567 GPAA1O43292 621 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms