RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 DEF6Q9H4E7 631 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 MYOM2P54296 1465 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 CTAGE5O15320 804 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 CBFA2T2O43439 604 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 ITGA6P23229 1130 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 UVSSAQ2YD98 709 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
CDH5-201ENST00000341529 CCDC196A0A1B0GTZ2 297 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 POLR3GO15318 223 aaPredicted RBP13.82□□□□□ -0.2
CDH5-201ENST00000341529 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
CDH5-201ENST00000341529 MBD4O95243 580 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
CDH5-201ENST00000341529 ZNF445P59923 1031 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 CMTR1Q8N1G2 835 aaKnown RBP13.82□□□□□ -0.2
CDH5-201ENST00000341529 PLIN2Q99541 437 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 ZNF652Q9Y2D9 606 aa13.82□□□□□ -0.2
CDH5-201ENST00000341529 DDB1Q16531 1140 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 NOM1Q5C9Z4 860 aaKnown RBP13.81□□□□□ -0.2
CDH5-201ENST00000341529 PLBD2Q8NHP8 589 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 PI16Q6UXB8 463 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 LEO1Q8WVC0 666 aaPredicted RBP13.81□□□□□ -0.2
CDH5-201ENST00000341529 IFNKQ9P0W0 207 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 IDEP14735 1019 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 UBASH3AP57075 661 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
CDH5-201ENST00000341529 DBNLQ9UJU6 430 aaKnown RBP13.81□□□□□ -0.2
CDH5-201ENST00000341529 GPAA1O43292 621 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
CDH5-201ENST00000341529 FTOQ9C0B1 505 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDH5-201ENST00000341529 ARMT1Q9H993 441 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 RTN1Q16799 776 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 MTMR6Q9Y217 621 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
CDH5-201ENST00000341529 HECW2Q9P2P5 1572 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 PATL2C9JE40 543 aaKnown RBP13.8□□□□□ -0.2
CDH5-201ENST00000341529 KIF4BQ2VIQ3 1234 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 DHX58Q96C10 678 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
CDH5-201ENST00000341529 TTF1Q15361 905 aaPredicted RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 NBPF5PQ86XG9 351 aaPredicted RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 PDCL3Q9H2J4 239 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 ARHGEF10O15013 1369 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 CCDC194A0A1B0GVG4 234 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 LSG1Q9H089 658 aaKnown RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 ZFYP08048 801 aaPredicted RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 GNG11P61952 73 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 LRMPQ12912 555 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 STIM1Q13586 685 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 AXDND1Q5T1B0 1012 aaPredicted RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 PKNOX2Q96KN3 472 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 FAM135BQ49AJ0 1406 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 RNF41Q9H4P4 317 aaPredicted RBP13.79□□□□□ -0.2
CDH5-201ENST00000341529 CBX8Q9HC52 389 aa13.79□□□□□ -0.2
CDH5-201ENST00000341529 HOXB7P09629 217 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 PHKG2P15735 406 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 STAMQ92783 540 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 PLXNC1O60486 1568 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 NR1I2O75469 434 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
CDH5-201ENST00000341529 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 UIMC1Q96RL1 719 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 RUFY1Q96T51 708 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 USP6P35125 1406 aa13.78□□□□□ -0.2
CDH5-201ENST00000341529 LMTK3Q96Q04 1460 aa13.77□□□□□ -0.2
CDH5-201ENST00000341529 FSD2A1L4K1 749 aa13.77□□□□□ -0.2
CDH5-201ENST00000341529 ADORA1P30542 326 aa13.77□□□□□ -0.2
CDH5-201ENST00000341529 PTPN21Q16825 1174 aa13.77□□□□□ -0.2
CDH5-201ENST00000341529 CCDC152Q4G0S7 254 aa13.77□□□□□ -0.2
CDH5-201ENST00000341529 NUP88Q99567 741 aaPredicted RBP13.77□□□□□ -0.2
CDH5-201ENST00000341529 AATKQ6ZMQ8 1374 aa13.77□□□□□ -0.2
CDH5-201ENST00000341529 ADD1P35611 737 aaKnown RBP13.77□□□□□ -0.21
CDH5-201ENST00000341529 EPHA10Q5JZY3 1008 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 NAA16Q6N069 864 aaPredicted RBP13.77□□□□□ -0.21
CDH5-201ENST00000341529 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 CEP131Q9UPN4 1083 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 SNAP23O00161 211 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 CHGBP05060 677 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 KIAA1328Q86T90 577 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 DHX37Q8IY37 1157 aaKnown RBP13.77□□□□□ -0.21
CDH5-201ENST00000341529 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
CDH5-201ENST00000341529 UBA5Q9GZZ9 404 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 MAPK8IP1Q9UQF2 711 aa13.77□□□□□ -0.21
CDH5-201ENST00000341529 SASH1O94885 1247 aa13.76□□□□□ -0.21
CDH5-201ENST00000341529 UQCRFS1P1P0C7P4 283 aa13.76□□□□□ -0.21
CDH5-201ENST00000341529 CCDC96Q2M329 555 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms