RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 KRT2P35908 639 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 PDE1AP54750 535 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 SP4Q02446 784 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 TFCP2Q12800 502 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 KSR2Q6VAB6 950 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 ATP2C2O75185 946 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
TNC-201ENST00000341037 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNC-201ENST00000341037 WDR70Q9NW82 654 aa12.96□□□□□ -0.33
TNC-201ENST00000341037 APOBRQ0VD83 1088 aa12.96□□□□□ -0.34
TNC-201ENST00000341037 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.34
TNC-201ENST00000341037 TMTC2Q8N394 836 aa12.96□□□□□ -0.34
TNC-201ENST00000341037 TBC1D32Q96NH3 1257 aa12.96□□□□□ -0.34
TNC-201ENST00000341037 WDR7Q9Y4E6 1490 aa12.96□□□□□ -0.34
TNC-201ENST00000341037 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.34
TNC-201ENST00000341037 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.34
TNC-201ENST00000341037 TNNI2P48788 182 aa12.96□□□□□ -0.34
TNC-201ENST00000341037 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.34
TNC-201ENST00000341037 CWF19L2Q2TBE0 894 aaKnown RBP12.96□□□□□ -0.34
TNC-201ENST00000341037 RTL9Q8NET4 1388 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 GOLGA6L9A6NEM1 432 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
TNC-201ENST00000341037 FAM13AO94988 1023 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 CEP112Q8N8E3 955 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 KCNG4Q8TDN1 519 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 ZBTB9Q96C00 473 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 C6orf50Q9HD87 102 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 GSTA5Q7RTV2 222 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 IL2RBP14784 551 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 ATP8B2P98198 1209 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 CTAGE1Q96RT6 745 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 PKD2L1Q9P0L9 805 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
TNC-201ENST00000341037 CCDC50Q8IVM0 306 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 TCHPQ9BT92 498 aa12.95□□□□□ -0.34
TNC-201ENST00000341037 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
TNC-201ENST00000341037 MRPS27Q92552 414 aaKnown RBP12.94□□□□□ -0.34
TNC-201ENST00000341037 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
TNC-201ENST00000341037 DNM1Q05193 864 aaKnown RBP12.94□□□□□ -0.34
TNC-201ENST00000341037 RIMS2Q9UQ26 1411 aa12.94□□□□□ -0.34
TNC-201ENST00000341037 RNF113AO15541 343 aaKnown RBP12.94□□□□□ -0.34
TNC-201ENST00000341037 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
TNC-201ENST00000341037 EHBP1Q8NDI1 1231 aa12.94□□□□□ -0.34
TNC-201ENST00000341037 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
TNC-201ENST00000341037 NSFL1CQ9UNZ2 370 aaKnown RBP12.94□□□□□ -0.34
TNC-201ENST00000341037 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
TNC-201ENST00000341037 RPRD2Q5VT52 1461 aaKnown RBP12.94□□□□□ -0.34
TNC-201ENST00000341037 USP37Q86T82 979 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 TOM1O60784 492 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 GNAQP50148 359 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
TNC-201ENST00000341037 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
TNC-201ENST00000341037 CCDC155Q8N6L0 562 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 ABCC1P33527 1531 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 BMP15O95972 392 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 BICC1Q9H694 974 aaKnown RBP12.93□□□□□ -0.34
TNC-201ENST00000341037 ALDH1L1O75891 902 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 PKNOX2Q96KN3 472 aa12.93□□□□□ -0.34
TNC-201ENST00000341037 STX17P56962 302 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 CKAP4Q07065 602 aaKnown RBP12.92□□□□□ -0.34
TNC-201ENST00000341037 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
TNC-201ENST00000341037 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
TNC-201ENST00000341037 CAPZA3Q96KX2 299 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 RASAL2Q9UJF2 1139 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 RAPGEF6Q8TEU7 1601 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 PSMA7O14818 248 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 F13A1P00488 732 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
TNC-201ENST00000341037 SRRTQ9BXP5 876 aaKnown RBP12.92□□□□□ -0.34
TNC-201ENST00000341037 IMPG2Q9BZV3 1241 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 POLD1P28340 1107 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 TPTE2Q6XPS3 522 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 ANKRD44Q8N8A2 993 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 LRRC45Q96CN5 670 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
TNC-201ENST00000341037 UBXN1Q04323 297 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 RBM17Q96I25 401 aaKnown RBP12.91□□□□□ -0.34
TNC-201ENST00000341037 DACT1Q9NYF0 836 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 KRT24Q2M2I5 525 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 CCDC63Q8NA47 563 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 GNAT2P19087 354 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 URB2Q14146 1524 aaKnown RBP12.91□□□□□ -0.34
TNC-201ENST00000341037 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
TNC-201ENST00000341037 IQCGQ9H095 443 aaKnown RBP12.91□□□□□ -0.34
TNC-201ENST00000341037 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms