RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PUS3Q9BZE2 481 aaKnown RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 RIC1Q4ADV7 1423 aa13.28□□□□□ -0.28
LRP1-202ENST00000338962 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 DDX46Q7L014 1031 aaKnown RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 AKAP2Q9Y2D5 859 aa13.28□□□□□ -0.28
LRP1-202ENST00000338962 ANKRD36CQ5JPF3 1778 aa13.28□□□□□ -0.28
LRP1-202ENST00000338962 CTSWP56202 376 aa13.27□□□□□ -0.28
LRP1-202ENST00000338962 PKP1Q13835 747 aa13.27□□□□□ -0.28
LRP1-202ENST00000338962 CREB3L3Q68CJ9 461 aa13.27□□□□□ -0.28
LRP1-202ENST00000338962 KBTBD3Q8NAB2 608 aa13.27□□□□□ -0.28
LRP1-202ENST00000338962 TTC14Q96N46 770 aa13.27□□□□□ -0.28
LRP1-202ENST00000338962 TM6SF1Q9BZW5 370 aa13.27□□□□□ -0.28
LRP1-202ENST00000338962 ABCC12Q96J65 1359 aa13.27□□□□□ -0.29
LRP1-202ENST00000338962 NRXN2Q9P2S2 1712 aa13.27□□□□□ -0.29
LRP1-202ENST00000338962 PDE8AO60658 829 aa13.27□□□□□ -0.29
LRP1-202ENST00000338962 ZNF589Q86UQ0 364 aaPredicted RBP13.27□□□□□ -0.29
LRP1-202ENST00000338962 KCNB2Q92953 911 aa13.27□□□□□ -0.29
LRP1-202ENST00000338962 PAG1Q9NWQ8 432 aa13.27□□□□□ -0.29
LRP1-202ENST00000338962 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
LRP1-202ENST00000338962 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
LRP1-202ENST00000338962 GOLIM4O00461 696 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 NPHP1O15259 732 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 BAG4O95429 457 aaKnown RBP13.26□□□□□ -0.29
LRP1-202ENST00000338962 HCLS1P14317 486 aaPredicted RBP13.26□□□□□ -0.29
LRP1-202ENST00000338962 ITGA6P23229 1130 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 AK2P54819 239 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 SF3B3Q15393 1217 aaKnown RBP13.26□□□□□ -0.29
LRP1-202ENST00000338962 GORABQ5T7V8 394 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 C10orf71Q711Q0 1435 aa13.26□□□□□ -0.29
LRP1-202ENST00000338962 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
LRP1-202ENST00000338962 SKOR2Q2VWA4 1001 aaPredicted RBP13.25□□□□□ -0.29
LRP1-202ENST00000338962 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 CCDC158Q5M9N0 1113 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 GZF1Q9H116 711 aaPredicted RBP13.25□□□□□ -0.29
LRP1-202ENST00000338962 GREM2Q9H772 168 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 LIMCH1Q9UPQ0 1083 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 ANKRD18BA2A2Z9 1011 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 SLC27A2O14975 620 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 TAF5LO75529 589 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 PSMA5P28066 241 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 PDE6BP35913 854 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 TICAM2Q86XR7 235 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 HMG20BQ9P0W2 317 aa13.25□□□□□ -0.29
LRP1-202ENST00000338962 CPA1P15085 419 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 TGFB2P61812 414 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 MCMDC2Q4G0Z9 681 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 PDRG1Q9NUG6 133 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 METTL24Q5JXM2 366 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 TTC39AQ5SRH9 613 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRP1-202ENST00000338962 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
LRP1-202ENST00000338962 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
LRP1-202ENST00000338962 XAGE2Q96GT9 111 aa13.23□□□□□ -0.29
LRP1-202ENST00000338962 RPAP1Q9BWH6 1393 aaPredicted RBP13.23□□□□□ -0.29
LRP1-202ENST00000338962 SRGNP10124 158 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
LRP1-202ENST00000338962 MCTP1Q6DN14 999 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
LRP1-202ENST00000338962 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.22□□□□□ -0.29
LRP1-202ENST00000338962 MYH3P11055 1940 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 CHGBP05060 677 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
LRP1-202ENST00000338962 ATP2B3Q16720 1220 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 LRRFIP1Q32MZ4 808 aaKnown RBP13.22□□□□□ -0.29
LRP1-202ENST00000338962 RIPOR2Q9Y4F9 1068 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
LRP1-202ENST00000338962 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
LRP1-202ENST00000338962 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 KCNA3P22001 575 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 ADORA1P30542 326 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 KRT32Q14532 448 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 BLOC1S2Q6QNY1 142 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
LRP1-202ENST00000338962 HELLSQ9NRZ9 838 aa13.21□□□□□ -0.29
LRP1-202ENST00000338962 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.21□□□□□ -0.29
LRP1-202ENST00000338962 H0YIN7 160 aa13.21□□□□□ -0.3
LRP1-202ENST00000338962 BRD1O95696 1058 aa13.21□□□□□ -0.3
LRP1-202ENST00000338962 ZSCAN31Q96LW9 406 aaPredicted RBP13.21□□□□□ -0.3
LRP1-202ENST00000338962 SH2B1Q9NRF2 756 aaPredicted RBP13.21□□□□□ -0.3
LRP1-202ENST00000338962 NPR1P16066 1061 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
LRP1-202ENST00000338962 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
LRP1-202ENST00000338962 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
LRP1-202ENST00000338962 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms