RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 SMARCE1Q969G3 411 aa23.69■■□□□ 1.38
RUNX3-202ENST00000338888 CARD6Q9BX69 1037 aa23.69■■□□□ 1.38
RUNX3-202ENST00000338888 FMN2Q9NZ56 1722 aa23.69■■□□□ 1.38
RUNX3-202ENST00000338888 BIN1O00499 593 aa23.68■■□□□ 1.38
RUNX3-202ENST00000338888 CHGBP05060 677 aa23.68■■□□□ 1.38
RUNX3-202ENST00000338888 CCDC129Q6ZRS4 1044 aa23.68■■□□□ 1.38
RUNX3-202ENST00000338888 SEC62Q99442 399 aaKnown RBP23.68■■□□□ 1.38
RUNX3-202ENST00000338888 TSPYL1Q9H0U9 437 aa23.68■■□□□ 1.38
RUNX3-202ENST00000338888 PCDHA7Q9UN72 937 aa23.68■■□□□ 1.38
RUNX3-202ENST00000338888 ESCO1Q5FWF5 840 aa23.68■■□□□ 1.38
RUNX3-202ENST00000338888 COL15A1P39059 1388 aa23.68■■□□□ 1.38
RUNX3-202ENST00000338888 PTPDC1A2A3K4 754 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 CTDNEP1O95476 244 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 TUBB4AP04350 444 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 CCT2P78371 535 aaKnown RBP23.67■■□□□ 1.38
RUNX3-202ENST00000338888 KRBA2Q6ZNG9 492 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 ABTB2Q8N961 1025 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 MRPS27Q92552 414 aaKnown RBP23.67■■□□□ 1.38
RUNX3-202ENST00000338888 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 PHF8Q9UPP1 1060 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 ALDH1L1O75891 902 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 CYP21A2P08686 494 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 KCNJ6P48051 423 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 TXLNBQ8N3L3 684 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 KIAA1468Q9P260 1216 aa23.67■■□□□ 1.38
RUNX3-202ENST00000338888 FANCGO15287 622 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 TADA3O75528 432 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 NDUFA8P51970 172 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 KLHDC4Q8TBB5 520 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 SUCLG2Q96I99 432 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 PHLPP2Q6ZVD8 1323 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 SASH3O75995 380 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 TRIM65Q6PJ69 517 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 NDUFB9Q9Y6M9 179 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 JCADQ9P266 1359 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 ANKARQ7Z5J8 1434 aa23.66■■□□□ 1.38
RUNX3-202ENST00000338888 PFKFB2O60825 505 aa23.65■■□□□ 1.38
RUNX3-202ENST00000338888 OAS2P29728 719 aaKnown RBP23.65■■□□□ 1.38
RUNX3-202ENST00000338888 LLPHQ9BRT6 129 aaKnown RBP23.65■■□□□ 1.38
RUNX3-202ENST00000338888 BICC1Q9H694 974 aaKnown RBP23.65■■□□□ 1.38
RUNX3-202ENST00000338888 HOXC9P31274 260 aa23.65■■□□□ 1.38
RUNX3-202ENST00000338888 APOBRQ0VD83 1088 aa23.65■■□□□ 1.38
RUNX3-202ENST00000338888 ILDR1Q86SU0 546 aaPredicted RBP23.65■■□□□ 1.38
RUNX3-202ENST00000338888 LMOD1P29536 600 aaPredicted RBP23.64■■□□□ 1.38
RUNX3-202ENST00000338888 NFATC2IPQ8NCF5 419 aa23.64■■□□□ 1.38
RUNX3-202ENST00000338888 CCDC34Q96HJ3 373 aa23.64■■□□□ 1.38
RUNX3-202ENST00000338888 KAZALD1Q96I82 304 aa23.64■■□□□ 1.38
RUNX3-202ENST00000338888 NCOA5Q9HCD5 579 aaKnown RBP23.64■■□□□ 1.38
RUNX3-202ENST00000338888 EVCP57679 992 aa23.64■■□□□ 1.37
RUNX3-202ENST00000338888 FAM177A1Q8N128 213 aaPredicted RBP23.64■■□□□ 1.37
RUNX3-202ENST00000338888 TBC1D8O95759 1140 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 EFCAB8A8MWE9 144 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 ISM2Q6H9L7 571 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 UBXN6Q9BZV1 441 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 SMC1AQ14683 1233 aaKnown RBP23.63■■□□□ 1.37
RUNX3-202ENST00000338888 PROSER3Q2NL68 480 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 ATL3Q6DD88 541 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 STOX1Q6ZVD7 989 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 UTP14AQ9BVJ6 771 aaKnown RBP23.63■■□□□ 1.37
RUNX3-202ENST00000338888 CHMP4AQ9BY43 222 aa23.63■■□□□ 1.37
RUNX3-202ENST00000338888 FANCCQ00597 558 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 NCAPHQ15003 741 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 ADALQ6DHV7 355 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 BPIFA3Q9BQP9 254 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 SRRTQ9BXP5 876 aaKnown RBP23.62■■□□□ 1.37
RUNX3-202ENST00000338888 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 CCP110O43303 1012 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 HOXB7P09629 217 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 ATP1A3P13637 1013 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 GOLGA8FQ08AF8 430 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 GOLGA8DPQ0D2H9 430 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 SF3A1Q15459 793 aaKnown RBP23.62■■□□□ 1.37
RUNX3-202ENST00000338888 LRRFIP1Q32MZ4 808 aaKnown RBP23.62■■□□□ 1.37
RUNX3-202ENST00000338888 MUM1L1Q5H9M0 696 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 CCDC158Q5M9N0 1113 aa23.62■■□□□ 1.37
RUNX3-202ENST00000338888 PROSER2Q86WR7 435 aaPredicted RBP23.62■■□□□ 1.37
RUNX3-202ENST00000338888 U3KPZ7 1027 aaPredicted RBP23.62■■□□□ 1.37
RUNX3-202ENST00000338888 CC2D1AQ6P1N0 951 aaPredicted RBP23.61■■□□□ 1.37
RUNX3-202ENST00000338888 DBF4Q9UBU7 674 aaPredicted RBP23.61■■□□□ 1.37
RUNX3-202ENST00000338888 GYS2P54840 703 aa23.61■■□□□ 1.37
RUNX3-202ENST00000338888 PSME1Q06323 249 aa23.61■■□□□ 1.37
RUNX3-202ENST00000338888 KSR2Q6VAB6 950 aa23.61■■□□□ 1.37
RUNX3-202ENST00000338888 HDAC5Q9UQL6 1122 aa23.61■■□□□ 1.37
RUNX3-202ENST00000338888 ATP8B1O43520 1251 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 SLC3A2P08195 630 aaKnown RBP23.6■■□□□ 1.37
RUNX3-202ENST00000338888 GPS2Q13227 327 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 ZSCAN26Q16670 478 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 PTPN21Q16825 1174 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 REXO1L1PQ8IX06 675 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 GRM8O00222 908 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 TPM1P09493 284 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 GNL2Q13823 731 aaKnown RBP23.6■■□□□ 1.37
RUNX3-202ENST00000338888 ORAI2Q96SN7 254 aa23.6■■□□□ 1.37
RUNX3-202ENST00000338888 TMX1Q9H3N1 280 aa23.59■■□□□ 1.37
RUNX3-202ENST00000338888 PIK3C2AO00443 1686 aa23.59■■□□□ 1.37
RUNX3-202ENST00000338888 HSPA2P54652 639 aa23.59■■□□□ 1.37
RUNX3-202ENST00000338888 NLRP12P59046 1061 aa23.59■■□□□ 1.37
RUNX3-202ENST00000338888 TEFQ10587 303 aa23.59■■□□□ 1.37
RUNX3-202ENST00000338888 DHX8Q14562 1220 aaKnown RBP23.59■■□□□ 1.37
RUNX3-202ENST00000338888 STK38Q15208 465 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms