RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PHKBQ93100 1093 aa16.4■□□□□ 0.22
PCDH8-201ENST00000338862 AIFM3Q96NN9 605 aa16.4■□□□□ 0.22
PCDH8-201ENST00000338862 IMMTQ16891 758 aaKnown RBP16.4■□□□□ 0.22
PCDH8-201ENST00000338862 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCDH8-201ENST00000338862 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
PCDH8-201ENST00000338862 KIF20AO95235 890 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 IP6K1Q92551 441 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 SYKP43405 635 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 CCDC158Q5M9N0 1113 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 RASSF8Q8NHQ8 419 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 PRC1O43663 620 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 GCP02774 474 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.21
PCDH8-201ENST00000338862 GPTP24298 496 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 CNNM3Q8NE01 707 aa16.39■□□□□ 0.21
PCDH8-201ENST00000338862 A2ML1A8K2U0 1454 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 ABCA9Q8IUA7 1624 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 NEURL1BA8MQ27 555 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 PLA2G4DQ86XP0 818 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
PCDH8-201ENST00000338862 FRMPD1Q5SYB0 1578 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 ADCY9O60503 1353 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 ARAP3Q8WWN8 1544 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 E7EWF7 191 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 IGKV5-2P06315 115 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 STX17P56962 302 aa16.38■□□□□ 0.21
PCDH8-201ENST00000338862 PHACTR2O75167 634 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 ZNF202O95125 648 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 GSDMDP57764 484 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 MCM6Q14566 821 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 ZNF827Q17R98 1081 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 PI16Q6UXB8 463 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 TRMT44Q8IYL2 757 aaKnown RBP16.37■□□□□ 0.21
PCDH8-201ENST00000338862 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
PCDH8-201ENST00000338862 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 LZTFL1Q9NQ48 299 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 ZNF213O14771 459 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
PCDH8-201ENST00000338862 NEMFO60524 1076 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 STOX1Q6ZVD7 989 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.37■□□□□ 0.21
PCDH8-201ENST00000338862 ERO1AQ96HE7 468 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 DESI2Q9BSY9 194 aa16.37■□□□□ 0.21
PCDH8-201ENST00000338862 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
PCDH8-201ENST00000338862 COBLO75128 1261 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 GYS2P54840 703 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 PNOCQ13519 176 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 BMS1Q14692 1282 aaKnown RBP16.36■□□□□ 0.21
PCDH8-201ENST00000338862 LRRC24Q50LG9 513 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 ZCCHC17Q9NP64 241 aaKnown RBP16.36■□□□□ 0.21
PCDH8-201ENST00000338862 CMTR1Q8N1G2 835 aaKnown RBP16.36■□□□□ 0.21
PCDH8-201ENST00000338862 ELP1O95163 1332 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 ADD1P35611 737 aaKnown RBP16.36■□□□□ 0.21
PCDH8-201ENST00000338862 FANCCQ00597 558 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 LRRN4CLQ8ND94 238 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 ZKSCAN3Q9BRR0 538 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
PCDH8-201ENST00000338862 ADKP55263 362 aaKnown RBP16.35■□□□□ 0.21
PCDH8-201ENST00000338862 USP32Q8NFA0 1604 aa16.35■□□□□ 0.21
PCDH8-201ENST00000338862 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
PCDH8-201ENST00000338862 ANKRD7Q92527 254 aa16.35■□□□□ 0.21
PCDH8-201ENST00000338862 PUS3Q9BZE2 481 aaKnown RBP16.35■□□□□ 0.21
PCDH8-201ENST00000338862 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
PCDH8-201ENST00000338862 UTP14CQ5TAP6 766 aaKnown RBP16.35■□□□□ 0.21
PCDH8-201ENST00000338862 HELBQ8NG08 1087 aaPredicted RBP16.35■□□□□ 0.21
PCDH8-201ENST00000338862 AFMP43652 599 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 LMAN1P49257 510 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 CCDC12Q8WUD4 166 aaPredicted RBP16.34■□□□□ 0.21
PCDH8-201ENST00000338862 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 KIAA1468Q9P260 1216 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
PCDH8-201ENST00000338862 PDIA3P30101 505 aaKnown RBP16.34■□□□□ 0.21
PCDH8-201ENST00000338862 CASQ1P31415 396 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 KAZALD1Q96I82 304 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 A0A1B0GUL7 405 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 EVCP57679 992 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 IQCB1Q15051 598 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 STRN4Q9NRL3 753 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
PCDH8-201ENST00000338862 CEP170BQ9Y4F5 1589 aaPredicted RBP16.34■□□□□ 0.21
PCDH8-201ENST00000338862 TMEM2Q9UHN6 1383 aa16.34■□□□□ 0.21
PCDH8-201ENST00000338862 A1BGP04217 495 aa16.33■□□□□ 0.21
PCDH8-201ENST00000338862 PDIA4P13667 645 aaKnown RBP16.33■□□□□ 0.21
PCDH8-201ENST00000338862 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.21
PCDH8-201ENST00000338862 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
PCDH8-201ENST00000338862 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCDH8-201ENST00000338862 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.2
PCDH8-201ENST00000338862 TIGD1Q96MW7 591 aa16.33■□□□□ 0.2
PCDH8-201ENST00000338862 CAVIN2O95810 425 aa16.33■□□□□ 0.2
PCDH8-201ENST00000338862 FAM193AP78312 1265 aa16.33■□□□□ 0.2
PCDH8-201ENST00000338862 MTX1Q13505 466 aa16.33■□□□□ 0.2
PCDH8-201ENST00000338862 STAMQ92783 540 aa16.33■□□□□ 0.2
PCDH8-201ENST00000338862 IQSEC3Q9UPP2 1182 aaPredicted RBP16.33■□□□□ 0.2
PCDH8-201ENST00000338862 ARHGAP31Q2M1Z3 1444 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms