RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 TEX11Q8IYF3 940 aa16.4■□□□□ 0.22
PARVB-201ENST00000338758 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
PARVB-201ENST00000338758 RPS8P62241 208 aaKnown RBP16.4■□□□□ 0.22
PARVB-201ENST00000338758 HEATR3Q7Z4Q2 680 aa16.4■□□□□ 0.22
PARVB-201ENST00000338758 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
PARVB-201ENST00000338758 ZSCAN16Q9H4T2 348 aaPredicted RBP16.4■□□□□ 0.22
PARVB-201ENST00000338758 H0YIN7 160 aa16.4■□□□□ 0.22
PARVB-201ENST00000338758 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
PARVB-201ENST00000338758 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
PARVB-201ENST00000338758 DDX19AQ9NUU7 478 aaKnown RBP16.39■□□□□ 0.21
PARVB-201ENST00000338758 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
PARVB-201ENST00000338758 SCLT1Q96NL6 688 aa16.39■□□□□ 0.21
PARVB-201ENST00000338758 LUC7LQ9NQ29 371 aaKnown RBP16.39■□□□□ 0.21
PARVB-201ENST00000338758 RXRAP19793 462 aa16.39■□□□□ 0.21
PARVB-201ENST00000338758 FAM227BQ96M60 508 aa16.39■□□□□ 0.21
PARVB-201ENST00000338758 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
PARVB-201ENST00000338758 ZKSCAN3Q9BRR0 538 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 KIF1BO60333 1816 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 APPBP2Q92624 585 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 CCP110O43303 1012 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 TTC6Q86TZ1 520 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 MAP3K4Q9Y6R4 1608 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 ABCC4O15439 1325 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 CTAGE5O15320 804 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 BEND3Q5T5X7 828 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 KBTBD3Q8NAB2 608 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 CALML4Q96GE6 196 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 SAMM50Q9Y512 469 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 ERBB4Q15303 1308 aa16.38■□□□□ 0.21
PARVB-201ENST00000338758 SEPT11Q9NVA2 429 aaKnown RBP16.37■□□□□ 0.21
PARVB-201ENST00000338758 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
PARVB-201ENST00000338758 KCNQ4P56696 695 aa16.37■□□□□ 0.21
PARVB-201ENST00000338758 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
PARVB-201ENST00000338758 TET3O43151 1660 aa16.37■□□□□ 0.21
PARVB-201ENST00000338758 GPAA1O43292 621 aa16.37■□□□□ 0.21
PARVB-201ENST00000338758 CCDC148Q8NFR7 591 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
PARVB-201ENST00000338758 KDM5CP41229 1560 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 PRAMEF22A3QJZ6 481 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 ZAP70P43403 619 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 NAPAP54920 295 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 LARGE2Q8N3Y3 721 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 EDC3Q96F86 508 aaKnown RBP16.36■□□□□ 0.21
PARVB-201ENST00000338758 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
PARVB-201ENST00000338758 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 PRDM1O75626 825 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 CTSWP56202 376 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 ISM2Q6H9L7 571 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 UBE2HP62256 183 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 CCDC102BQ68D86 513 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 SNX21Q969T3 373 aa16.36■□□□□ 0.21
PARVB-201ENST00000338758 B4E1Z4 1266 aa16.35■□□□□ 0.21
PARVB-201ENST00000338758 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
PARVB-201ENST00000338758 GRM1Q13255 1194 aa16.35■□□□□ 0.21
PARVB-201ENST00000338758 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
PARVB-201ENST00000338758 TRIM37O94972 964 aa16.35■□□□□ 0.21
PARVB-201ENST00000338758 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
PARVB-201ENST00000338758 ZBTB38Q8NAP3 1195 aaPredicted RBP16.35■□□□□ 0.21
PARVB-201ENST00000338758 MROH5Q6ZUA9 1318 aa16.35■□□□□ 0.21
PARVB-201ENST00000338758 TRAF1Q13077 416 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 PPP4R3AQ6IN85 833 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 CALM1P0DP23 149 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 CALM2P0DP24 149 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 CALM3P0DP25 149 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 SGSM2O43147 1006 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 RUFY1Q96T51 708 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 KDRP35968 1356 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 ANKARQ7Z5J8 1434 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
PARVB-201ENST00000338758 TSG101Q99816 390 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 AATFQ9NY61 560 aaKnown RBP eCLIP16.34■□□□□ 0.21
PARVB-201ENST00000338758 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
PARVB-201ENST00000338758 CNPY2Q9Y2B0 182 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
PARVB-201ENST00000338758 LIG1P18858 919 aa16.33■□□□□ 0.21
PARVB-201ENST00000338758 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.21
PARVB-201ENST00000338758 SHROOM2Q13796 1616 aa16.33■□□□□ 0.21
PARVB-201ENST00000338758 PTPDC1A2A3K4 754 aa16.33■□□□□ 0.21
PARVB-201ENST00000338758 PCCAP05165 728 aaPredicted RBP16.33■□□□□ 0.21
PARVB-201ENST00000338758 NF2P35240 595 aa16.33■□□□□ 0.2
PARVB-201ENST00000338758 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
PARVB-201ENST00000338758 DNM1Q05193 864 aaKnown RBP16.33■□□□□ 0.2
PARVB-201ENST00000338758 HSP90AA2PQ14568 343 aaPredicted RBP16.33■□□□□ 0.2
PARVB-201ENST00000338758 AMPD3Q01432 767 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
PARVB-201ENST00000338758 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.2
PARVB-201ENST00000338758 SYKP43405 635 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 KIF20AO95235 890 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms