RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM210AQ96ND0 272 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 MMRN2Q9H8L6 949 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 GKAP1Q5VSY0 366 aaPredicted RBP11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 MTRF1LQ9UGC7 380 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 MYH8P13535 1937 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 MTMR3Q13615 1198 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 TTC19Q6DKK2 380 aaPredicted RBP11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 TXNDC16Q9P2K2 825 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 NOB1Q9ULX3 412 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 TACC3Q9Y6A5 838 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 GOLGA8KD6RF30 607 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 ITGB1BP2Q9UKP3 347 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 CRCPO75575 148 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 TRIM14Q14142 442 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 ISM2Q6H9L7 571 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 GDAP1L1Q96MZ0 367 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 ABCC11Q96J66 1382 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 SYCP3Q8IZU3 236 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 TSC22D3Q99576 134 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 ANKRD30BQ9BXX2 1392 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 MAP3K1Q13233 1512 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 KIAA1524Q8TCG1 905 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 HMGB3O15347 200 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 ALDH1L2Q3SY69 923 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 MKL2Q9ULH7 1088 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 TPX2Q9ULW0 747 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 APLFQ8IW19 511 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 CCDC68Q9H2F9 335 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 COG7P83436 770 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 EIF2AQ9BY44 585 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 TAF7Q15545 349 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 MCUR1Q96AQ8 359 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 RAB34Q9BZG1 259 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 TMEM266Q2M3C6 531 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 NKIRAS1Q9NYS0 192 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 ARHGEF2Q92974 986 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 CARMIL2Q6F5E8 1435 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 TXNDC9O14530 226 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 TTF2Q9UNY4 1162 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
SPTBN1-201ENST00000333896 BIN1O00499 593 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 FSIP1Q8NA03 581 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 CCT6BQ92526 530 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 TMEM110-MUSTN1A8MSY1 372 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 APBA1Q02410 837 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 RAPGEF4Q8WZA2 1011 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 ACTR5Q9H9F9 607 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 AACSQ86V21 672 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 HMG20BQ9P0W2 317 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 AKAP2Q9Y2D5 859 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 CCDC25Q86WR0 208 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 DAAM1Q9Y4D1 1078 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 PTGS1P23219 599 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 SCOCQ9UIL1 159 aa11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 FAF1Q9UNN5 650 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-201ENST00000333896 ATICP31939 592 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 SESN3P58005 492 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 DUSP27Q5VZP5 1158 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 HSPA1LP34931 641 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 NUCB1Q02818 461 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 BIRC2Q13490 618 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 PHACTR2O75167 634 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 PHF23Q9BUL5 403 aaPredicted RBP11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 SDCCAG8Q86SQ7 713 aaPredicted RBP11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 CCDC26Q8TAB7 109 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 VIMP08670 466 aaKnown RBP11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 DEUP1Q05D60 604 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 NAPGQ99747 312 aaPredicted RBP11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 INPP1P49441 399 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 CCDC152Q4G0S7 254 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 UBLCP1Q8WVY7 318 aaPredicted RBP11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 CA8P35219 290 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 CCDC14Q49A88 953 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 CAPZA3Q96KX2 299 aa11.61□□□□□ -0.55
SPTBN1-201ENST00000333896 IFT81Q8WYA0 676 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 JPH2Q9BR39 696 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 GOLGA8AA7E2F4 631 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 GOLGA8BA8MQT2 603 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 ZNF131P52739 623 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 RRP36Q96EU6 259 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 C8orf76Q96K31 380 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 BATF3Q9NR55 127 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 NCOA1Q15788 1441 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 292.2 ms