RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ALDH1L1O75891 902 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 CTDNEP1O95476 244 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 CASQ1P31415 396 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 GYS2P54840 703 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 SRLQ86TD4 932 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 GPR161Q8N6U8 529 aaKnown RBP14.84□□□□□ -0.03
CCDC60-201ENST00000327554 IQUBQ8NA54 791 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 ZNF396Q96N95 335 aaPredicted RBP14.84□□□□□ -0.03
CCDC60-201ENST00000327554 TLR7Q9NYK1 1049 aaKnown RBP14.84□□□□□ -0.03
CCDC60-201ENST00000327554 CHPF2Q9P2E5 772 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 PCDHA7Q9UN72 937 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 NWD1Q149M9 1564 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 RSRC2Q7L4I2 434 aaKnown RBP14.84□□□□□ -0.03
CCDC60-201ENST00000327554 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 CCDC8Q9H0W5 538 aaPredicted RBP14.84□□□□□ -0.03
CCDC60-201ENST00000327554 BOLA2Q9H3K6 86 aa14.84□□□□□ -0.03
CCDC60-201ENST00000327554 CWC15Q9P013 229 aaKnown RBP14.84□□□□□ -0.03
CCDC60-201ENST00000327554 DHX16O60231 1041 aaKnown RBP14.83□□□□□ -0.04
CCDC60-201ENST00000327554 PFKFB2O60825 505 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 EIF2S2P20042 333 aaKnown RBP14.83□□□□□ -0.04
CCDC60-201ENST00000327554 ADAM21Q9UKJ8 722 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 KDM3BQ7LBC6 1761 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 A0A1B0GVL5 298 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 H3BQF6 201 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 NDUFA8P51970 172 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 FANCCQ00597 558 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 AK7Q96M32 723 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 HSD3B7Q9H2F3 369 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 ARFGAP3Q9NP61 516 aa14.83□□□□□ -0.04
CCDC60-201ENST00000327554 RRP15Q9Y3B9 282 aaKnown RBP14.83□□□□□ -0.04
CCDC60-201ENST00000327554 AGLP35573 1532 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.82□□□□□ -0.04
CCDC60-201ENST00000327554 PLEKHG3A1L390 1219 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 VWA3AA6NCI4 1184 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 MAP3K9P80192 1104 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 FMNL2Q96PY5 1086 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 LRRC2Q9BYS8 371 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 MED1Q15648 1581 aaPredicted RBP14.82□□□□□ -0.04
CCDC60-201ENST00000327554 A0A1W2PQ27 194 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 A0A1W2PQ64 194 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 A0A1W2PQD8 194 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 PTPDC1A2A3K4 754 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 NLRP12P59046 1061 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 ADALQ6DHV7 355 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 PARD6BQ9BYG5 372 aa14.82□□□□□ -0.04
CCDC60-201ENST00000327554 ATP1A3P13637 1013 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 FCHSD1Q86WN1 690 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 ZFP91Q96JP5 570 aaPredicted RBP14.81□□□□□ -0.04
CCDC60-201ENST00000327554 MPHOSPH8Q99549 860 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 UTP14AQ9BVJ6 771 aaKnown RBP14.81□□□□□ -0.04
CCDC60-201ENST00000327554 SALL1Q9NSC2 1324 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 BIN1O00499 593 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 ANXA1P04083 346 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 LMOD1P29536 600 aaPredicted RBP14.81□□□□□ -0.04
CCDC60-201ENST00000327554 ACTN2P35609 894 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 LMAN1P49257 510 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 TMEM139Q8IV31 216 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 DPF2Q92785 391 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 ZBTB9Q96C00 473 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 SEC62Q99442 399 aaKnown RBP14.81□□□□□ -0.04
CCDC60-201ENST00000327554 SIL1Q9H173 461 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 MRFAP1Q9Y605 127 aa14.81□□□□□ -0.04
CCDC60-201ENST00000327554 NCAPD2Q15021 1401 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 PLEKHG2Q9H7P9 1386 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 CYP21A2P08686 494 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 PPP2R3AQ06190 1150 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 WDR24Q96S15 920 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 YY1AP1Q9H869 796 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 RTEL1Q9NZ71 1219 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 MAP2K7O14733 419 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 IKBKBO14920 756 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 EIF4A1P60842 406 aaKnown RBP14.8□□□□□ -0.04
CCDC60-201ENST00000327554 GUCY1B3Q02153 619 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 ZRSR1Q15695 479 aaKnown RBP14.8□□□□□ -0.04
CCDC60-201ENST00000327554 RABGGTAQ92696 567 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 EDC3Q96F86 508 aaKnown RBP14.8□□□□□ -0.04
CCDC60-201ENST00000327554 PPP2R2CQ9Y2T4 447 aa14.8□□□□□ -0.04
CCDC60-201ENST00000327554 GOLGA8FQ08AF8 430 aa14.79□□□□□ -0.04
CCDC60-201ENST00000327554 GOLGA8DPQ0D2H9 430 aa14.79□□□□□ -0.04
CCDC60-201ENST00000327554 LONRF2Q1L5Z9 754 aa14.79□□□□□ -0.04
CCDC60-201ENST00000327554 STOX1Q6ZVD7 989 aa14.79□□□□□ -0.04
CCDC60-201ENST00000327554 ZSCAN12O43309 604 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 SLC3A2P08195 630 aaKnown RBP14.78□□□□□ -0.04
CCDC60-201ENST00000327554 AMPHP49418 695 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 CTR9Q6PD62 1173 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 C9orf78Q9NZ63 289 aaPredicted RBP14.78□□□□□ -0.04
CCDC60-201ENST00000327554 HOXB7P09629 217 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 GNL2Q13823 731 aaKnown RBP14.78□□□□□ -0.04
CCDC60-201ENST00000327554 FAM177A1Q8N128 213 aaPredicted RBP14.78□□□□□ -0.04
CCDC60-201ENST00000327554 LINC00301Q8NCQ3 95 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 KIFC2Q96AC6 838 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 KAZALD1Q96I82 304 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 ROBO2Q9HCK4 1378 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 MRC1P22897 1456 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 ZNF609O15014 1411 aa14.78□□□□□ -0.04
CCDC60-201ENST00000327554 CEMIPQ8WUJ3 1361 aa14.77□□□□□ -0.04
CCDC60-201ENST00000327554 APOBRQ0VD83 1088 aa14.77□□□□□ -0.04
CCDC60-201ENST00000327554 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.04
CCDC60-201ENST00000327554 VSTM4Q8IW00 320 aa14.77□□□□□ -0.04
CCDC60-201ENST00000327554 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms