RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 SEC62Q99442 399 aaKnown RBP23.39■■□□□ 1.33
SOX2-201ENST00000325404 CDCA7Q9BWT1 371 aaPredicted RBP23.39■■□□□ 1.33
SOX2-201ENST00000325404 PAG1Q9NWQ8 432 aa23.39■■□□□ 1.33
SOX2-201ENST00000325404 RCOR1Q9UKL0 485 aa23.39■■□□□ 1.33
SOX2-201ENST00000325404 NBPF26B4DH59 902 aa23.38■■□□□ 1.33
SOX2-201ENST00000325404 NBPF14Q5TI25 921 aa23.38■■□□□ 1.33
SOX2-201ENST00000325404 NBPF10Q6P3W6 841 aaKnown RBP23.38■■□□□ 1.33
SOX2-201ENST00000325404 NBPF15Q8N660 670 aa23.38■■□□□ 1.33
SOX2-201ENST00000325404 PIGBQ92521 554 aa23.38■■□□□ 1.33
SOX2-201ENST00000325404 DDX46Q7L014 1031 aaKnown RBP23.38■■□□□ 1.33
SOX2-201ENST00000325404 PLA2G4DQ86XP0 818 aa23.38■■□□□ 1.33
SOX2-201ENST00000325404 NSUN7Q8NE18 718 aaKnown RBP23.38■■□□□ 1.33
SOX2-201ENST00000325404 BICD2Q8TD16 824 aa23.38■■□□□ 1.33
SOX2-201ENST00000325404 JARID2Q92833 1246 aaPredicted RBP23.38■■□□□ 1.33
SOX2-201ENST00000325404 UBAP1LF5GYI3 381 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 NR1I2O75469 434 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 CIAO1O76071 339 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 STOX1Q6ZVD7 989 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 CWC25Q9NXE8 425 aaPredicted RBP23.37■■□□□ 1.33
SOX2-201ENST00000325404 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
SOX2-201ENST00000325404 LUZP1Q86V48 1076 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 CKAP2LQ8IYA6 745 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 THRAP3Q9Y2W1 955 aaKnown RBP23.37■■□□□ 1.33
SOX2-201ENST00000325404 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 SPATA31A1Q5TZJ5 1347 aa23.37■■□□□ 1.33
SOX2-201ENST00000325404 ADD1P35611 737 aaKnown RBP23.36■■□□□ 1.33
SOX2-201ENST00000325404 A1BGP04217 495 aa23.36■■□□□ 1.33
SOX2-201ENST00000325404 CDC25BP30305 580 aa23.36■■□□□ 1.33
SOX2-201ENST00000325404 ZNF274Q96GC6 653 aaPredicted RBP23.36■■□□□ 1.33
SOX2-201ENST00000325404 PYCARDQ9ULZ3 195 aa23.36■■□□□ 1.33
SOX2-201ENST00000325404 FGD1P98174 961 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 ASAP1Q9ULH1 1129 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 NRAPQ86VF7 1730 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 ZNF75DP51815 510 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 NUP188Q5SRE5 1749 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 CCDC191Q8NCU4 936 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 NDUFB9Q9Y6M9 179 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 LRP6O75581 1613 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 SALL1Q9NSC2 1324 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 WNK3Q9BYP7 1800 aa23.35■■□□□ 1.33
SOX2-201ENST00000325404 ZNF165P49910 485 aa23.34■■□□□ 1.33
SOX2-201ENST00000325404 VSIG10Q8N0Z9 540 aa23.34■■□□□ 1.33
SOX2-201ENST00000325404 EYA2O00167 538 aa23.34■■□□□ 1.33
SOX2-201ENST00000325404 C17orf53Q8N3J3 647 aaPredicted RBP23.34■■□□□ 1.33
SOX2-201ENST00000325404 SPC24Q8NBT2 197 aa23.34■■□□□ 1.33
SOX2-201ENST00000325404 ZNF396Q96N95 335 aaPredicted RBP23.34■■□□□ 1.33
SOX2-201ENST00000325404 TEX13AQ9BXU3 409 aaPredicted RBP23.34■■□□□ 1.33
SOX2-201ENST00000325404 FBXO3Q9UK99 471 aa23.34■■□□□ 1.33
SOX2-201ENST00000325404 LAMA4Q16363 1823 aa23.34■■□□□ 1.33
SOX2-201ENST00000325404 GOLIM4O00461 696 aa23.33■■□□□ 1.33
SOX2-201ENST00000325404 EVCP57679 992 aa23.33■■□□□ 1.33
SOX2-201ENST00000325404 LRRFIP1Q32MZ4 808 aaKnown RBP23.33■■□□□ 1.33
SOX2-201ENST00000325404 RNF113AO15541 343 aaKnown RBP23.33■■□□□ 1.33
SOX2-201ENST00000325404 CTDNEP1O95476 244 aa23.33■■□□□ 1.33
SOX2-201ENST00000325404 CHAF1AQ13111 956 aaPredicted RBP23.33■■□□□ 1.33
SOX2-201ENST00000325404 SARM1Q6SZW1 724 aa23.33■■□□□ 1.33
SOX2-201ENST00000325404 MYH15Q9Y2K3 1946 aa23.33■■□□□ 1.32
SOX2-201ENST00000325404 BCL9O00512 1426 aa23.33■■□□□ 1.32
SOX2-201ENST00000325404 HSPD1P10809 573 aaKnown RBP23.32■■□□□ 1.32
SOX2-201ENST00000325404 DDX11Q96FC9 970 aa23.32■■□□□ 1.32
SOX2-201ENST00000325404 TJP1Q07157 1748 aa23.32■■□□□ 1.32
SOX2-201ENST00000325404 PTPDC1A2A3K4 754 aa23.32■■□□□ 1.32
SOX2-201ENST00000325404 NEUROD6Q96NK8 337 aa23.32■■□□□ 1.32
SOX2-201ENST00000325404 E7EWF7 191 aa23.31■■□□□ 1.32
SOX2-201ENST00000325404 CHGBP05060 677 aa23.31■■□□□ 1.32
SOX2-201ENST00000325404 ITGB4P16144 1822 aa23.31■■□□□ 1.32
SOX2-201ENST00000325404 DDB1Q16531 1140 aa23.31■■□□□ 1.32
SOX2-201ENST00000325404 TTLL7Q6ZT98 887 aa23.31■■□□□ 1.32
SOX2-201ENST00000325404 SLIT2O94813 1529 aa23.3■■□□□ 1.32
SOX2-201ENST00000325404 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
SOX2-201ENST00000325404 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
SOX2-201ENST00000325404 PTGS1P23219 599 aa23.3■■□□□ 1.32
SOX2-201ENST00000325404 RGS22Q8NE09 1264 aa23.3■■□□□ 1.32
SOX2-201ENST00000325404 TRIM5Q9C035 493 aa23.3■■□□□ 1.32
SOX2-201ENST00000325404 IFIT1P09914 478 aaKnown RBP23.29■■□□□ 1.32
SOX2-201ENST00000325404 APOBRQ0VD83 1088 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 CCDC186Q7Z3E2 898 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 DNAJC10Q8IXB1 793 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 NWD2Q9ULI1 1742 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 MAST3O60307 1309 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 TIMM10P62072 90 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 IQCB1Q15051 598 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 STX1AQ16623 288 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 SYTL4Q96C24 671 aaPredicted RBP23.29■■□□□ 1.32
SOX2-201ENST00000325404 DNAJC25Q9H1X3 360 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 CTNNA3Q9UI47 895 aa23.29■■□□□ 1.32
SOX2-201ENST00000325404 CCDC9Q9Y3X0 531 aaKnown RBP23.29■■□□□ 1.32
SOX2-201ENST00000325404 ZFYP08048 801 aaPredicted RBP23.28■■□□□ 1.32
SOX2-201ENST00000325404 PDIA3P30101 505 aaKnown RBP23.28■■□□□ 1.32
SOX2-201ENST00000325404 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
SOX2-201ENST00000325404 ABCC12Q96J65 1359 aa23.28■■□□□ 1.32
SOX2-201ENST00000325404 STARD3NLO95772 234 aa23.28■■□□□ 1.32
SOX2-201ENST00000325404 CCAR1Q8IX12 1150 aaKnown RBP23.28■■□□□ 1.32
SOX2-201ENST00000325404 CCDC73Q6ZRK6 1079 aa23.27■■□□□ 1.32
SOX2-201ENST00000325404 ENGASEQ8NFI3 743 aa23.27■■□□□ 1.32
SOX2-201ENST00000325404 MRFAP1L1Q96HT8 127 aa23.27■■□□□ 1.32
SOX2-201ENST00000325404 A0A1B0GUL7 405 aa23.27■■□□□ 1.32
SOX2-201ENST00000325404 NEMFO60524 1076 aa23.27■■□□□ 1.32
SOX2-201ENST00000325404 FAM160A1Q05DH4 1040 aa23.27■■□□□ 1.32
SOX2-201ENST00000325404 SNW1Q13573 536 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms