RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
CBX3P1-201ENST00000325243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.94□□□□□ -1.3
CBX3P1-201ENST00000325243 NFIAQ12857 509 aa6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 TRIM42Q8IWZ5 723 aa6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 UTP4Q969X6 686 aaKnown RBP6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 KLHDC7BQ96G42 594 aa6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 POP1Q99575 1024 aaKnown RBP6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 GOLGA2P5Q9HBQ8 144 aa6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 TMEM63CQ9P1W3 806 aa6.93□□□□□ -1.3
CBX3P1-201ENST00000325243 HMX2A2RU54 273 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 COBLO75128 1261 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 ADAMTS4O75173 837 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 ATG7O95352 703 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 DUOXA2Q1HG44 320 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 UVSSAQ2YD98 709 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 NCAPG2Q86XI2 1143 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 KLHL23Q8NBE8 558 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 CLP1Q92989 425 aaKnown RBP6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 KRTAP9-9Q9BYP9 154 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 KANSL3Q9P2N6 904 aa6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
CBX3P1-201ENST00000325243 ACPPP15309 386 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 PTPRAP18433 802 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 FAM117BQ6P1L5 589 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 ATCAYQ86WG3 371 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 ABTB2Q8N961 1025 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 NUDT16Q96DE0 195 aaKnown RBP6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 MYRFLQ96LU7 910 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 ADAM19Q9H013 955 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 ELP3Q9H9T3 547 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 SEC31BQ9NQW1 1179 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 SEPT3Q9UH03 358 aa6.91□□□□□ -1.3
CBX3P1-201ENST00000325243 RNF43Q68DV7 783 aa6.9□□□□□ -1.3
CBX3P1-201ENST00000325243 PDE12Q6L8Q7 609 aaKnown RBP6.9□□□□□ -1.3
CBX3P1-201ENST00000325243 ZMYND15Q9H091 742 aa6.9□□□□□ -1.3
CBX3P1-201ENST00000325243 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 H3BRJ5 948 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 NFKBIEO00221 500 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 SPINK2P20155 84 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 IRAK1P51617 712 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 GP2P55259 537 aaKnown RBP6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 FAM20CQ8IXL6 584 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 DBNDD2Q9BQY9 259 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
CBX3P1-201ENST00000325243 TRPA1O75762 1119 aa6.88□□□□□ -1.31
CBX3P1-201ENST00000325243 PREPP48147 710 aa6.88□□□□□ -1.31
CBX3P1-201ENST00000325243 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.88□□□□□ -1.31
CBX3P1-201ENST00000325243 NLRP12P59046 1061 aa6.87□□□□□ -1.31
CBX3P1-201ENST00000325243 PIP4K2BP78356 416 aa6.87□□□□□ -1.31
CBX3P1-201ENST00000325243 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
CBX3P1-201ENST00000325243 CLEC10AQ8IUN9 316 aa6.87□□□□□ -1.31
CBX3P1-201ENST00000325243 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
CBX3P1-201ENST00000325243 DZANK1Q9NVP4 752 aa6.87□□□□□ -1.31
CBX3P1-201ENST00000325243 A6NHS1 94 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 PAX4O43316 350 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 BMP3P12645 472 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 TAL1P17542 331 aaPredicted RBP6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 ATP2B4P23634 1241 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 INTS5Q6P9B9 1019 aaKnown RBP6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 DTX1Q86Y01 620 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 SHKBP1Q8TBC3 707 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 EDEM1Q92611 657 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 WNT8BQ93098 351 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 FMNL2Q96PY5 1086 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 FAM83CQ9BQN1 747 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 GGNBP2Q9H3C7 697 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 OSGEPQ9NPF4 335 aa6.86□□□□□ -1.31
CBX3P1-201ENST00000325243 FAM177BA6PVY3 158 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 PDE2AO00408 941 aaPredicted RBP6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 SART1O43290 800 aaKnown RBP6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 CES1P23141 567 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 GRIK1P39086 918 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 CABP4P57796 275 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 ANKRD34AQ69YU3 496 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 BEND4Q6ZU67 534 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 SLC7A3Q8WY07 619 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 RUSC1Q9BVN2 902 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 RNF208Q9H0X6 261 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 CHRDQ9H2X0 955 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 KCNF1Q9H3M0 494 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 SOX13Q9UN79 622 aa6.85□□□□□ -1.31
CBX3P1-201ENST00000325243 DNM1Q05193 864 aaKnown RBP6.84□□□□□ -1.31
CBX3P1-201ENST00000325243 XKR5Q6UX68 686 aa6.84□□□□□ -1.31
CBX3P1-201ENST00000325243 PDGFAP04085 211 aa6.83□□□□□ -1.32
CBX3P1-201ENST00000325243 HELQQ8TDG4 1101 aa6.83□□□□□ -1.32
CBX3P1-201ENST00000325243 PBXIP1Q96AQ6 731 aa6.83□□□□□ -1.32
CBX3P1-201ENST00000325243 HOXA10P31260 410 aaPredicted RBP6.82□□□□□ -1.32
CBX3P1-201ENST00000325243 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
CBX3P1-201ENST00000325243 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
CBX3P1-201ENST00000325243 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
CBX3P1-201ENST00000325243 WDR64B1ANS9 1081 aa6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 RPLP1P05386 114 aaKnown RBP6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 TXKP42681 527 aa6.81□□□□□ -1.32
CBX3P1-201ENST00000325243 C19orf57Q0VDD7 668 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms