RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ANKRD7Q92527 254 aa20.31■□□□□ 0.84
SCAMP4-201ENST00000316097 GPATCH3Q96I76 525 aa20.31■□□□□ 0.84
SCAMP4-201ENST00000316097 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-201ENST00000316097 PTGS1P23219 599 aa20.3■□□□□ 0.84
SCAMP4-201ENST00000316097 CCDC57Q2TAC2 916 aa20.3■□□□□ 0.84
SCAMP4-201ENST00000316097 CHGBP05060 677 aa20.3■□□□□ 0.84
SCAMP4-201ENST00000316097 GREM2Q9H772 168 aa20.29■□□□□ 0.84
SCAMP4-201ENST00000316097 IRS4O14654 1257 aaPredicted RBP20.29■□□□□ 0.84
SCAMP4-201ENST00000316097 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
SCAMP4-201ENST00000316097 CTIFO43310 598 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-201ENST00000316097 ZNF34Q8IZ26 560 aa20.28■□□□□ 0.84
SCAMP4-201ENST00000316097 SMARCC1Q92922 1105 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-201ENST00000316097 ERVV-1B6SEH8 477 aa20.28■□□□□ 0.84
SCAMP4-201ENST00000316097 EYA2O00167 538 aa20.28■□□□□ 0.84
SCAMP4-201ENST00000316097 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
SCAMP4-201ENST00000316097 CAMTA2O94983 1202 aa20.27■□□□□ 0.84
SCAMP4-201ENST00000316097 HSP90AB3PQ58FF7 597 aa20.27■□□□□ 0.84
SCAMP4-201ENST00000316097 FAM200AQ8TCP9 573 aa20.27■□□□□ 0.84
SCAMP4-201ENST00000316097 KIF20AO95235 890 aa20.27■□□□□ 0.83
SCAMP4-201ENST00000316097 CAMK4Q16566 473 aa20.27■□□□□ 0.83
SCAMP4-201ENST00000316097 FAM227BQ96M60 508 aa20.27■□□□□ 0.83
SCAMP4-201ENST00000316097 DNAJC2Q99543 621 aaKnown RBP20.27■□□□□ 0.83
SCAMP4-201ENST00000316097 MYH14Q7Z406 1995 aaKnown RBP20.27■□□□□ 0.83
SCAMP4-201ENST00000316097 LUZP1Q86V48 1076 aa20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 JAKMIP1Q96N16 626 aaKnown RBP20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 CSF1RP07333 972 aa20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 IFIT5Q13325 482 aaKnown RBP20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 TAF7LQ5H9L4 462 aa20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 SEPT12Q8IYM1 358 aa20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 KLHL34Q8N239 644 aa20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 PDRG1Q9NUG6 133 aa20.26■□□□□ 0.83
SCAMP4-201ENST00000316097 IGSF3O75054 1194 aa20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 ITGA6P23229 1130 aa20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 ADCK5Q3MIX3 580 aa20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 EVI5LQ96CN4 794 aa20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 IL15P40933 162 aaPredicted RBP20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 MAP3K11Q16584 847 aa20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 CCDC186Q7Z3E2 898 aa20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 NUP62CLQ9H1M0 184 aa20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 QTRT2Q9H974 415 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 NIP7Q9Y221 180 aaKnown RBP eCLIP20.25■□□□□ 0.83
SCAMP4-201ENST00000316097 TYRO3Q06418 890 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 LRMPQ12912 555 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 BICDL1Q6ZP65 573 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 TTC6Q86TZ1 520 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 C16orf45Q96MC5 204 aaPredicted RBP20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 MRVI1Q9Y6F6 885 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 LIG1P18858 919 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 NCBP1Q09161 790 aaKnown RBP20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 DRC7Q8IY82 874 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 FSD1Q9BTV5 496 aa20.24■□□□□ 0.83
SCAMP4-201ENST00000316097 CTSWP56202 376 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 ST3GAL1Q11201 340 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 SLFNL1Q499Z3 407 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 PRPF40BQ6NWY9 871 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 FERMT3Q86UX7 667 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 NECAB1Q8N987 351 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 A0A1B0GUL7 405 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 PTH1RQ03431 593 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 CKAP2LQ8IYA6 745 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 PLA2G12BQ9BX93 195 aa20.23■□□□□ 0.83
SCAMP4-201ENST00000316097 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 NMIQ13287 307 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 FAM173BQ6P4H8 233 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 SH2B1Q9NRF2 756 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 ADORA1P30542 326 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 KRT85P78386 507 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 ME3Q16798 604 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 LDHAL6AQ6ZMR3 332 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 DDX46Q7L014 1031 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 ZSCAN31Q96LW9 406 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 CEP126Q9P2H0 1117 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 NRBP1Q9UHY1 535 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 CYP46A1Q9Y6A2 500 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 NUP98P52948 1817 aa20.22■□□□□ 0.83
SCAMP4-201ENST00000316097 ATP5JP18859 108 aa20.21■□□□□ 0.83
SCAMP4-201ENST00000316097 TRPC5Q9UL62 973 aaPredicted RBP20.21■□□□□ 0.83
SCAMP4-201ENST00000316097 CDHR2Q9BYE9 1310 aa20.21■□□□□ 0.83
SCAMP4-201ENST00000316097 A0A0D9SFI3 127 aa20.21■□□□□ 0.83
SCAMP4-201ENST00000316097 ANO6Q4KMQ2 910 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 LARP1BQ659C4 914 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 FEZ1Q99689 392 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 CBX8Q9HC52 389 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 CCNL1Q9UK58 526 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 PDE8AO60658 829 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 CDC37L1Q7L3B6 337 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 HELBQ8NG08 1087 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 TNMDQ9H2S6 317 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 SRP68Q9UHB9 627 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 UTP14AQ9BVJ6 771 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 TRIM5Q9C035 493 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 ZSWIM6Q9HCJ5 1215 aa20.2■□□□□ 0.82
SCAMP4-201ENST00000316097 SMTNL1A8MU46 457 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 TNNT1P13805 278 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 SNRKQ9NRH2 765 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 DACT1Q9NYF0 836 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 ANKRD18BA2A2Z9 1011 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms