RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 AFF2P51816 1311 aa21.91■■□□□ 1.1
CCDC43-201ENST00000315286 ZFYP08048 801 aaPredicted RBP21.91■■□□□ 1.1
CCDC43-201ENST00000315286 RC3H1Q5TC82 1133 aaKnown RBP21.91■■□□□ 1.1
CCDC43-201ENST00000315286 CCDC102BQ68D86 513 aa21.91■■□□□ 1.1
CCDC43-201ENST00000315286 NEK1Q96PY6 1258 aa21.91■■□□□ 1.1
CCDC43-201ENST00000315286 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
CCDC43-201ENST00000315286 PHKA1P46020 1223 aa21.91■■□□□ 1.1
CCDC43-201ENST00000315286 ST3GAL1Q11201 340 aa21.91■■□□□ 1.1
CCDC43-201ENST00000315286 MYH7P12883 1935 aa21.9■■□□□ 1.1
CCDC43-201ENST00000315286 TOB2Q14106 344 aaPredicted RBP21.9■■□□□ 1.1
CCDC43-201ENST00000315286 WASHC4Q2M389 1173 aa21.9■■□□□ 1.1
CCDC43-201ENST00000315286 ERFEQ4G0M1 354 aa21.9■■□□□ 1.1
CCDC43-201ENST00000315286 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
CCDC43-201ENST00000315286 LMBRD1Q9NUN5 540 aa21.9■■□□□ 1.1
CCDC43-201ENST00000315286 SMC3Q9UQE7 1217 aa21.9■■□□□ 1.1
CCDC43-201ENST00000315286 SNAP23O00161 211 aa21.89■■□□□ 1.1
CCDC43-201ENST00000315286 RPS6KA4O75676 772 aa21.89■■□□□ 1.1
CCDC43-201ENST00000315286 ANKRD1Q15327 319 aa21.89■■□□□ 1.1
CCDC43-201ENST00000315286 NECAB1Q8N987 351 aa21.89■■□□□ 1.1
CCDC43-201ENST00000315286 CCNL1Q9UK58 526 aaPredicted RBP21.89■■□□□ 1.1
CCDC43-201ENST00000315286 IGHMBP2P38935 993 aaKnown RBP21.89■■□□□ 1.09
CCDC43-201ENST00000315286 BICDL1Q6ZP65 573 aa21.89■■□□□ 1.09
CCDC43-201ENST00000315286 STOX1Q6ZVD7 989 aa21.89■■□□□ 1.09
CCDC43-201ENST00000315286 DTNBO60941 627 aa21.88■■□□□ 1.09
CCDC43-201ENST00000315286 ARID4AP29374 1257 aaPredicted RBP21.88■■□□□ 1.09
CCDC43-201ENST00000315286 TBC1D9BQ66K14 1250 aa21.88■■□□□ 1.09
CCDC43-201ENST00000315286 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
CCDC43-201ENST00000315286 WDR33Q9C0J8 1336 aaKnown RBP21.88■■□□□ 1.09
CCDC43-201ENST00000315286 A0A0G2JLW4 131 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 APPBP2Q92624 585 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 NARFQ9UHQ1 456 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 GNPATO15228 680 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 ONECUT3O60422 494 aaPredicted RBP21.87■■□□□ 1.09
CCDC43-201ENST00000315286 UQCRFS1P1P0C7P4 283 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 SLC5A1P13866 664 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 C3orf67Q6ZVT6 689 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 PUS7LQ9H0K6 701 aaKnown RBP21.87■■□□□ 1.09
CCDC43-201ENST00000315286 SRP68Q9UHB9 627 aaKnown RBP21.87■■□□□ 1.09
CCDC43-201ENST00000315286 DDX49Q9Y6V7 483 aaKnown RBP21.87■■□□□ 1.09
CCDC43-201ENST00000315286 ARAP2Q8WZ64 1704 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 SBF2Q86WG5 1849 aa21.87■■□□□ 1.09
CCDC43-201ENST00000315286 LAMA4Q16363 1823 aa21.86■■□□□ 1.09
CCDC43-201ENST00000315286 RGL2O15211 777 aa21.86■■□□□ 1.09
CCDC43-201ENST00000315286 PRPF40AO75400 957 aaKnown RBP21.86■■□□□ 1.09
CCDC43-201ENST00000315286 PIH1D3Q9NQM4 214 aaKnown RBP21.86■■□□□ 1.09
CCDC43-201ENST00000315286 SCN7AQ01118 1682 aa21.86■■□□□ 1.09
CCDC43-201ENST00000315286 COL4A1P02462 1669 aa21.86■■□□□ 1.09
CCDC43-201ENST00000315286 SYT1P21579 422 aa21.86■■□□□ 1.09
CCDC43-201ENST00000315286 GJB2P29033 226 aa21.86■■□□□ 1.09
CCDC43-201ENST00000315286 TTF1Q15361 905 aaPredicted RBP21.86■■□□□ 1.09
CCDC43-201ENST00000315286 KLHL40Q2TBA0 621 aa21.86■■□□□ 1.09
CCDC43-201ENST00000315286 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.86■■□□□ 1.09
CCDC43-201ENST00000315286 FOXP2O15409 715 aa21.85■■□□□ 1.09
CCDC43-201ENST00000315286 AMIGO3Q86WK7 504 aa21.85■■□□□ 1.09
CCDC43-201ENST00000315286 ADD2P35612 726 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 SF3B3Q15393 1217 aaKnown RBP21.84■■□□□ 1.09
CCDC43-201ENST00000315286 TTLL5Q6EMB2 1281 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 SEPT12Q8IYM1 358 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 TRPC5Q9UL62 973 aaPredicted RBP21.84■■□□□ 1.09
CCDC43-201ENST00000315286 ATRNO75882 1429 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 STX6O43752 255 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 CHRNDQ07001 517 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 SLC9C2Q5TAH2 1124 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 Q6ZUG5 572 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 CDC5LQ99459 802 aaKnown RBP21.84■■□□□ 1.09
CCDC43-201ENST00000315286 RTCBQ9Y3I0 505 aaKnown RBP21.84■■□□□ 1.09
CCDC43-201ENST00000315286 LY75O60449 1722 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 TAF1P21675 1872 aa21.84■■□□□ 1.09
CCDC43-201ENST00000315286 TAF1LQ8IZX4 1826 aa21.83■■□□□ 1.09
CCDC43-201ENST00000315286 ZSCAN25Q6NSZ9 544 aa21.83■■□□□ 1.09
CCDC43-201ENST00000315286 CASZ1Q86V15 1759 aa21.83■■□□□ 1.08
CCDC43-201ENST00000315286 FSD2A1L4K1 749 aa21.83■■□□□ 1.08
CCDC43-201ENST00000315286 E7EWF7 191 aa21.83■■□□□ 1.08
CCDC43-201ENST00000315286 ZPR1O75312 459 aa21.83■■□□□ 1.08
CCDC43-201ENST00000315286 IDH1O75874 414 aaKnown RBP21.83■■□□□ 1.08
CCDC43-201ENST00000315286 HMGB1P09429 215 aaKnown RBP21.83■■□□□ 1.08
CCDC43-201ENST00000315286 GTF2E1P29083 439 aaPredicted RBP21.83■■□□□ 1.08
CCDC43-201ENST00000315286 SLC10A5Q5PT55 438 aa21.83■■□□□ 1.08
CCDC43-201ENST00000315286 GPAA1O43292 621 aa21.82■■□□□ 1.08
CCDC43-201ENST00000315286 ZSCAN22P10073 491 aaPredicted RBP21.82■■□□□ 1.08
CCDC43-201ENST00000315286 FOXD4L6Q3SYB3 417 aaPredicted RBP21.82■■□□□ 1.08
CCDC43-201ENST00000315286 FOXD4L3Q6VB84 417 aaPredicted RBP21.82■■□□□ 1.08
CCDC43-201ENST00000315286 DHX32Q7L7V1 743 aaKnown RBP21.82■■□□□ 1.08
CCDC43-201ENST00000315286 SPATA5Q8NB90 893 aa21.82■■□□□ 1.08
CCDC43-201ENST00000315286 ARHGEF1Q92888 912 aaKnown RBP21.82■■□□□ 1.08
CCDC43-201ENST00000315286 SETDB2Q96T68 719 aa21.82■■□□□ 1.08
CCDC43-201ENST00000315286 LRRC2Q9BYS8 371 aa21.82■■□□□ 1.08
CCDC43-201ENST00000315286 TCHHQ07283 1943 aa21.82■■□□□ 1.08
CCDC43-201ENST00000315286 GOLGA6L3A6NEY3 463 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 RASGRF1Q13972 1273 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 FGAP02671 866 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 BCAMP50895 628 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 STK3Q13188 491 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 UBE3CQ15386 1083 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 ANKRD18AQ8IVF6 992 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 CTNNA3Q9UI47 895 aa21.81■■□□□ 1.08
CCDC43-201ENST00000315286 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
CCDC43-201ENST00000315286 WWC3Q9ULE0 1092 aa21.8■■□□□ 1.08
CCDC43-201ENST00000315286 NYXQ9GZU5 481 aa21.79■■□□□ 1.08
CCDC43-201ENST00000315286 ZNF532Q9HCE3 1301 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms