RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 NBPF14Q5TI25 921 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 CALCOCO1Q9P1Z2 691 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 NUCB1Q02818 461 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 SLC4A4Q9Y6R1 1079 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 CYP7A1P22680 504 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 CHPF2Q9P2E5 772 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 V9GYY5 206 aaPredicted RBP12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 BRAPQ7Z569 592 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 PAG1Q9NWQ8 432 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 CA8P35219 290 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 ATL3Q6DD88 541 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 DISP3Q9P2K9 1392 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 MAST3O60307 1309 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 DDB1Q16531 1140 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 USP25Q9UHP3 1055 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 SNX16P57768 344 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 KRT2P35908 639 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 ADGRF5Q8IZF2 1346 aa12.84□□□□□ -0.35
VCPIP1-201ENST00000310421 FAM13AO94988 1023 aa12.83□□□□□ -0.35
VCPIP1-201ENST00000310421 TNNT1P13805 278 aa12.83□□□□□ -0.35
VCPIP1-201ENST00000310421 PLS1Q14651 629 aa12.83□□□□□ -0.35
VCPIP1-201ENST00000310421 VTI1AQ96AJ9 217 aa12.83□□□□□ -0.35
VCPIP1-201ENST00000310421 RTCBQ9Y3I0 505 aaKnown RBP12.83□□□□□ -0.35
VCPIP1-201ENST00000310421 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 RGS22Q8NE09 1264 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 C16orf45Q96MC5 204 aaPredicted RBP12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 SLC8A3P57103 927 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 ASIC1P78348 528 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 VAT1LQ9HCJ6 419 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 KRT83P78385 493 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 RAD50Q92878 1312 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 PPP1R2P41236 205 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 DNA2P51530 1060 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 GABPB2Q8TAK5 448 aaPredicted RBP12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 MRPS27Q92552 414 aaKnown RBP12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 TNPO1Q92973 898 aaKnown RBP12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 ODF2LQ9ULJ1 636 aa12.83□□□□□ -0.36
VCPIP1-201ENST00000310421 ZSCAN22P10073 491 aaPredicted RBP12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 RBM10P98175 930 aaKnown RBP12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 KSR2Q6VAB6 950 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 ABCC2Q92887 1545 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 KLF18A0A0U1RQI7 1052 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 TRIM75PA6NK02 468 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 RPL13P26373 211 aaKnown RBP12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 RRAGBQ5VZM2 374 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 FRMD4BQ9Y2L6 1034 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 KRT86O43790 486 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 ALDH3A1P30838 453 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 ALG1Q9BT22 464 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 SMTNP53814 917 aa12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
VCPIP1-201ENST00000310421 TACC1O75410 805 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 TAF12Q16514 161 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 OTUD6BQ8N6M0 293 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 NAP1L3Q99457 506 aaPredicted RBP12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 ADCY5O95622 1261 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 ATP5J2-PTCD1G3V325 749 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 ERICH4A6NGS2 130 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 UBASH3AP57075 661 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 HAND2P61296 217 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 ZNF354CQ86Y25 554 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 KIFAP3Q92845 792 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 LDHBP07195 334 aaKnown RBP12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 TUBBP07437 444 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 PICK1Q9NRD5 415 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 RHPN1Q8TCX5 695 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 DCAF5Q96JK2 942 aa12.81□□□□□ -0.36
VCPIP1-201ENST00000310421 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 HMGB1P1B2RPK0 211 aaPredicted RBP12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 CLUL1Q15846 466 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 CEP135Q66GS9 1140 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 OPA1O60313 960 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 RNF187Q5TA31 235 aaPredicted RBP12.8□□□□□ -0.36
VCPIP1-201ENST00000310421 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms