RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PNMA6EA0A0J9YXQ4 647 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 PDE6BP35913 854 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 BAG6P46379 1132 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 NFKBIBQ15653 356 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 KBTBD3Q8NAB2 608 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 R3HCC1Q9Y3T6 440 aaKnown RBP7.05□□□□□ -1.28
SEC22A-201ENST00000309934 MYCNP04198 464 aaPredicted RBP7.05□□□□□ -1.28
SEC22A-201ENST00000309934 TFCP2Q12800 502 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 SEPT12Q8IYM1 358 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 ZNF396Q96N95 335 aaPredicted RBP7.05□□□□□ -1.28
SEC22A-201ENST00000309934 TSPYL1Q9H0U9 437 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 PKD1L3Q7Z443 1732 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 DLG5Q8TDM6 1919 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 PPP2R5BQ15173 497 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 SOGA3Q5TF21 947 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 TBC1D22AQ8WUA7 517 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 ZNF512BQ96KM6 892 aaPredicted RBP7.05□□□□□ -1.28
SEC22A-201ENST00000309934 HAUS7Q99871 368 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 DSCC1Q9BVC3 393 aa7.05□□□□□ -1.28
SEC22A-201ENST00000309934 HOOK1Q9UJC3 728 aaKnown RBP7.05□□□□□ -1.28
SEC22A-201ENST00000309934 CCDC171Q6TFL3 1326 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 DISP2A7MBM2 1401 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 USP26Q9BXU7 913 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 RBM27Q9P2N5 1060 aaKnown RBP7.04□□□□□ -1.28
SEC22A-201ENST00000309934 LEMD3Q9Y2U8 911 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 SGSM2O43147 1006 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 TPM4P67936 248 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 VPS53Q5VIR6 699 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 NFXL1Q6ZNB6 911 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 TTLL7Q6ZT98 887 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 PAIP2Q9BPZ3 127 aaKnown RBP7.04□□□□□ -1.28
SEC22A-201ENST00000309934 CRNKL1Q9BZJ0 848 aaKnown RBP7.04□□□□□ -1.28
SEC22A-201ENST00000309934 SLKQ9H2G2 1235 aaPredicted RBP7.04□□□□□ -1.28
SEC22A-201ENST00000309934 RAI14Q9P0K7 980 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 A0A1B0GUL7 405 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 ZNF213O14771 459 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 NRDCO43847 1150 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 ATP2B4P23634 1241 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 EIF5P55010 431 aaKnown RBP7.04□□□□□ -1.28
SEC22A-201ENST00000309934 PROSER3Q2NL68 480 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 TRIM22Q8IYM9 498 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 APPBP2Q92624 585 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 JAKMIP1Q96N16 626 aaKnown RBP7.04□□□□□ -1.28
SEC22A-201ENST00000309934 TOMM22Q9NS69 142 aa7.04□□□□□ -1.28
SEC22A-201ENST00000309934 RTL9Q8NET4 1388 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 MAP4K4O95819 1239 aaPredicted RBP7.03□□□□□ -1.28
SEC22A-201ENST00000309934 TRAF1Q13077 416 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 NAPBQ9H115 298 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 ANKIB1Q9P2G1 1089 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 ZBTB1Q9Y2K1 713 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 KDM3BQ7LBC6 1761 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 NWD2Q9ULI1 1742 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 SLIT2O94813 1529 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 BBOX1O75936 387 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 KIF20AO95235 890 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 IGKV5-2P06315 115 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 SETQ01105 290 aaPredicted RBP7.03□□□□□ -1.28
SEC22A-201ENST00000309934 NCOA7Q8NI08 942 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 IDH1O75874 414 aaKnown RBP7.03□□□□□ -1.28
SEC22A-201ENST00000309934 TDO2P48775 406 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 PDIA6Q15084 440 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.03□□□□□ -1.28
SEC22A-201ENST00000309934 DZIP1Q86YF9 867 aaKnown RBP7.03□□□□□ -1.28
SEC22A-201ENST00000309934 JMYQ8N9B5 988 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 TMOD2Q9NZR1 351 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 LTBP4Q8N2S1 1624 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 DDX60Q8IY21 1712 aaKnown RBP7.03□□□□□ -1.28
SEC22A-201ENST00000309934 FAM177BA6PVY3 158 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 MPHOSPH10O00566 681 aaKnown RBP7.03□□□□□ -1.28
SEC22A-201ENST00000309934 BICDL1Q6ZP65 573 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 ZNF34Q8IZ26 560 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 TFCP2L1Q9NZI6 479 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 MRVI1Q9Y6F6 885 aa7.03□□□□□ -1.28
SEC22A-201ENST00000309934 CCDC69A6NI79 296 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 CALM1P0DP23 149 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 CALM2P0DP24 149 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 CALM3P0DP25 149 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 GTF2A1P52655 376 aaPredicted RBP7.02□□□□□ -1.29
SEC22A-201ENST00000309934 UBE3CQ15386 1083 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 ATL3Q6DD88 541 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 SIRT2Q8IXJ6 389 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 FAM89AQ96GI7 184 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 XAGE2Q96GT9 111 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 ZNF830Q96NB3 372 aaPredicted RBP7.02□□□□□ -1.29
SEC22A-201ENST00000309934 NEK1Q96PY6 1258 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 ZBTB22O15209 634 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 PDE8BO95263 885 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 POLD1P28340 1107 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 PDE4BQ07343 736 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 DHX8Q14562 1220 aaKnown RBP7.02□□□□□ -1.29
SEC22A-201ENST00000309934 UBAC1Q9BSL1 405 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 CFAP45Q9UL16 551 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 CSF1RP07333 972 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 MCM5P33992 734 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 RPS8P62241 208 aaKnown RBP7.02□□□□□ -1.29
SEC22A-201ENST00000309934 PTPN12Q05209 780 aaKnown RBP7.02□□□□□ -1.29
SEC22A-201ENST00000309934 MARCH10Q8NA82 808 aaPredicted RBP7.02□□□□□ -1.29
SEC22A-201ENST00000309934 LLPHQ9BRT6 129 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms