RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 INTS4Q96HW7 963 aaKnown RBP10.97□□□□□ -0.65
PDPN-201ENST00000294489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.97□□□□□ -0.65
PDPN-201ENST00000294489 TAF5LO75529 589 aa10.97□□□□□ -0.65
PDPN-201ENST00000294489 CUL4AQ13619 759 aa10.97□□□□□ -0.65
PDPN-201ENST00000294489 NFIXQ14938 502 aa10.97□□□□□ -0.65
PDPN-201ENST00000294489 TTC39AQ5SRH9 613 aa10.97□□□□□ -0.65
PDPN-201ENST00000294489 RNF20Q5VTR2 975 aa10.97□□□□□ -0.65
PDPN-201ENST00000294489 RASEFQ8IZ41 740 aa10.97□□□□□ -0.65
PDPN-201ENST00000294489 ZGPATQ8N5A5 531 aaKnown RBP10.97□□□□□ -0.65
PDPN-201ENST00000294489 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
PDPN-201ENST00000294489 KIAA1551Q9HCM1 1747 aa10.96□□□□□ -0.65
PDPN-201ENST00000294489 SCARF1Q14162 830 aa10.96□□□□□ -0.65
PDPN-201ENST00000294489 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
PDPN-201ENST00000294489 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.65
PDPN-201ENST00000294489 RBM8AQ9Y5S9 174 aaKnown RBP10.96□□□□□ -0.65
PDPN-201ENST00000294489 NDUFB9Q9Y6M9 179 aa10.96□□□□□ -0.65
PDPN-201ENST00000294489 EP400Q96L91 3159 aa10.96□□□□□ -0.65
PDPN-201ENST00000294489 RPAP1Q9BWH6 1393 aaPredicted RBP10.96□□□□□ -0.65
PDPN-201ENST00000294489 GOLIM4O00461 696 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 TRAK2O60296 914 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 UQCRFS1P1P0C7P4 283 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 MCAMP43121 646 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 LTBP1Q14766 1721 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 MCMDC2Q4G0Z9 681 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 DDX46Q7L014 1031 aaKnown RBP10.96□□□□□ -0.66
PDPN-201ENST00000294489 ZNF589Q86UQ0 364 aaPredicted RBP10.96□□□□□ -0.66
PDPN-201ENST00000294489 MPHOSPH8Q99549 860 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.66
PDPN-201ENST00000294489 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
PDPN-201ENST00000294489 CASTP20810 708 aaKnown RBP10.95□□□□□ -0.66
PDPN-201ENST00000294489 CHRNDQ07001 517 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 GORABQ5T7V8 394 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 CLEC17AQ6ZS10 378 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 TTC14Q96N46 770 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
PDPN-201ENST00000294489 SLC5A1P13866 664 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 CCDC102BQ68D86 513 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 ANKRD18AQ8IVF6 992 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 ZNF804BA4D1E1 1349 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 PSMA5P28066 241 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 CREB3L3Q68CJ9 461 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 FBXO41Q8TF61 875 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 JAKMIP1Q96N16 626 aaKnown RBP10.95□□□□□ -0.66
PDPN-201ENST00000294489 NLRP3Q96P20 1036 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 CYP46A1Q9Y6A2 500 aa10.95□□□□□ -0.66
PDPN-201ENST00000294489 SKOR2Q2VWA4 1001 aaPredicted RBP10.94□□□□□ -0.66
PDPN-201ENST00000294489 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
PDPN-201ENST00000294489 IRS2Q9Y4H2 1338 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 MAST2Q6P0Q8 1798 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 KLRG2A4D1S0 409 aaPredicted RBP10.94□□□□□ -0.66
PDPN-201ENST00000294489 PHF14O94880 888 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 CYP2E1P05181 493 aaPredicted RBP10.94□□□□□ -0.66
PDPN-201ENST00000294489 ZAP70P43403 619 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 UBE4AQ14139 1066 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 LRRFIP1Q32MZ4 808 aaKnown RBP10.94□□□□□ -0.66
PDPN-201ENST00000294489 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 VPS53Q5VIR6 699 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 HMG20BQ9P0W2 317 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 MINPP1Q9UNW1 487 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 LIMCH1Q9UPQ0 1083 aa10.94□□□□□ -0.66
PDPN-201ENST00000294489 SLC27A2O14975 620 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 PHKA1P46020 1223 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 AK2P54819 239 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 TTF1Q15361 905 aaPredicted RBP10.93□□□□□ -0.66
PDPN-201ENST00000294489 DSCC1Q9BVC3 393 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 PDRG1Q9NUG6 133 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 BAG4O95429 457 aaKnown RBP10.93□□□□□ -0.66
PDPN-201ENST00000294489 CHGBP05060 677 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 ZNF827Q17R98 1081 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 POTEAQ6S8J7 498 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 CELF1Q92879 486 aaKnown RBP10.93□□□□□ -0.66
PDPN-201ENST00000294489 PRR5LQ6MZQ0 368 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
PDPN-201ENST00000294489 MAST3O60307 1309 aa10.93□□□□□ -0.66
PDPN-201ENST00000294489 PDS5AQ29RF7 1337 aaKnown RBP10.92□□□□□ -0.66
PDPN-201ENST00000294489 POLRMTO00411 1230 aaKnown RBP10.92□□□□□ -0.66
PDPN-201ENST00000294489 RPS8P62241 208 aaKnown RBP10.92□□□□□ -0.66
PDPN-201ENST00000294489 ADCK5Q3MIX3 580 aa10.92□□□□□ -0.66
PDPN-201ENST00000294489 SEC62Q99442 399 aaKnown RBP10.92□□□□□ -0.66
PDPN-201ENST00000294489 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
PDPN-201ENST00000294489 CACNA1SQ13698 1873 aa10.92□□□□□ -0.66
PDPN-201ENST00000294489 PKP1Q13835 747 aa10.92□□□□□ -0.66
PDPN-201ENST00000294489 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
PDPN-201ENST00000294489 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.92□□□□□ -0.66
PDPN-201ENST00000294489 TCRBV5S4A2TA0A5A2 114 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 APBA3O96018 575 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
PDPN-201ENST00000294489 ADD2P35612 726 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDPN-201ENST00000294489 KRT32Q14532 448 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 UBE3CQ15386 1083 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 CNBD1Q8NA66 436 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 PIH1D3Q9NQM4 214 aaKnown RBP10.91□□□□□ -0.66
PDPN-201ENST00000294489 COL11A2P13942 1736 aaPredicted RBP10.91□□□□□ -0.66
PDPN-201ENST00000294489 M0R2C6 588 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 FOXP2O15409 715 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 DDR1Q08345 913 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms