RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 HMGB1P09429 215 aaKnown RBP19.8■□□□□ 0.76
CHRNE-201ENST00000293780 TTLL5Q6EMB2 1281 aa19.8■□□□□ 0.76
CHRNE-201ENST00000293780 DSCC1Q9BVC3 393 aa19.8■□□□□ 0.76
CHRNE-201ENST00000293780 RCOR1Q9UKL0 485 aa19.8■□□□□ 0.76
CHRNE-201ENST00000293780 CCDC144BQ3MJ40 725 aa19.79■□□□□ 0.76
CHRNE-201ENST00000293780 ZSCAN25Q6NSZ9 544 aa19.79■□□□□ 0.76
CHRNE-201ENST00000293780 CCDC144CPQ8IYA2 1237 aa19.79■□□□□ 0.76
CHRNE-201ENST00000293780 A1BGP04217 495 aa19.79■□□□□ 0.76
CHRNE-201ENST00000293780 IQCB1Q15051 598 aa19.79■□□□□ 0.76
CHRNE-201ENST00000293780 NAA16Q6N069 864 aaPredicted RBP19.79■□□□□ 0.76
CHRNE-201ENST00000293780 PUS3Q9BZE2 481 aaKnown RBP19.79■□□□□ 0.76
CHRNE-201ENST00000293780 MAST3O60307 1309 aa19.78■□□□□ 0.76
CHRNE-201ENST00000293780 M0R2C6 588 aa19.78■□□□□ 0.76
CHRNE-201ENST00000293780 ATF3P18847 181 aa19.78■□□□□ 0.76
CHRNE-201ENST00000293780 ZBTB3Q9H5J0 574 aa19.78■□□□□ 0.76
CHRNE-201ENST00000293780 CWC25Q9NXE8 425 aaPredicted RBP19.78■□□□□ 0.76
CHRNE-201ENST00000293780 CLIP2Q9UDT6 1046 aa19.78■□□□□ 0.76
CHRNE-201ENST00000293780 MST1RQ04912 1400 aa19.78■□□□□ 0.76
CHRNE-201ENST00000293780 IFIT1P09914 478 aaKnown RBP19.78■□□□□ 0.76
CHRNE-201ENST00000293780 PDIA3P30101 505 aaKnown RBP19.78■□□□□ 0.76
CHRNE-201ENST00000293780 SNW1Q13573 536 aaKnown RBP19.78■□□□□ 0.76
CHRNE-201ENST00000293780 ILDR1Q86SU0 546 aaPredicted RBP19.78■□□□□ 0.76
CHRNE-201ENST00000293780 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
CHRNE-201ENST00000293780 GPHNQ9NQX3 736 aaPredicted RBP19.78■□□□□ 0.76
CHRNE-201ENST00000293780 COL18A1P39060 1754 aa19.77■□□□□ 0.76
CHRNE-201ENST00000293780 IL15P40933 162 aaPredicted RBP19.77■□□□□ 0.76
CHRNE-201ENST00000293780 CACTINQ8WUQ7 758 aaKnown RBP19.77■□□□□ 0.76
CHRNE-201ENST00000293780 ERCC4Q92889 916 aaPredicted RBP19.77■□□□□ 0.76
CHRNE-201ENST00000293780 RNF113AO15541 343 aaKnown RBP19.77■□□□□ 0.75
CHRNE-201ENST00000293780 CHAF1AQ13111 956 aaPredicted RBP19.77■□□□□ 0.75
CHRNE-201ENST00000293780 CCDC94Q9BW85 323 aaPredicted RBP19.77■□□□□ 0.75
CHRNE-201ENST00000293780 A0A1B0GUL7 405 aa19.76■□□□□ 0.75
CHRNE-201ENST00000293780 EYA2O00167 538 aa19.76■□□□□ 0.75
CHRNE-201ENST00000293780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.76■□□□□ 0.75
CHRNE-201ENST00000293780 KIF1AQ12756 1690 aa19.76■□□□□ 0.75
CHRNE-201ENST00000293780 SALL1Q9NSC2 1324 aa19.76■□□□□ 0.75
CHRNE-201ENST00000293780 OSBP2Q969R2 916 aa19.76■□□□□ 0.75
CHRNE-201ENST00000293780 C16orf45Q96MC5 204 aaPredicted RBP19.76■□□□□ 0.75
CHRNE-201ENST00000293780 GPR108Q9NPR9 543 aa19.76■□□□□ 0.75
CHRNE-201ENST00000293780 GLI3P10071 1580 aa19.75■□□□□ 0.75
CHRNE-201ENST00000293780 FDPSP14324 419 aaKnown RBP19.75■□□□□ 0.75
CHRNE-201ENST00000293780 FKBP4Q02790 459 aaKnown RBP eCLIP19.75■□□□□ 0.75
CHRNE-201ENST00000293780 ARID5BQ14865 1188 aa19.75■□□□□ 0.75
CHRNE-201ENST00000293780 OTUD7BQ6GQQ9 843 aa19.75■□□□□ 0.75
CHRNE-201ENST00000293780 SMAP1Q8IYB5 467 aaPredicted RBP19.75■□□□□ 0.75
CHRNE-201ENST00000293780 GOLGA6L19H0YKK7 550 aa19.74■□□□□ 0.75
CHRNE-201ENST00000293780 ENGASEQ8NFI3 743 aa19.74■□□□□ 0.75
CHRNE-201ENST00000293780 FBXW7Q969H0 707 aa19.74■□□□□ 0.75
CHRNE-201ENST00000293780 ME1P48163 572 aa19.74■□□□□ 0.75
CHRNE-201ENST00000293780 HAND2P61296 217 aa19.74■□□□□ 0.75
CHRNE-201ENST00000293780 MYH15Q9Y2K3 1946 aa19.74■□□□□ 0.75
CHRNE-201ENST00000293780 ADORA1P30542 326 aa19.73■□□□□ 0.75
CHRNE-201ENST00000293780 STX1AQ16623 288 aa19.73■□□□□ 0.75
CHRNE-201ENST00000293780 CCDC73Q6ZRK6 1079 aa19.73■□□□□ 0.75
CHRNE-201ENST00000293780 FSIP1Q8NA03 581 aa19.73■□□□□ 0.75
CHRNE-201ENST00000293780 ZNF274Q96GC6 653 aaPredicted RBP19.73■□□□□ 0.75
CHRNE-201ENST00000293780 ZNF396Q96N95 335 aaPredicted RBP19.73■□□□□ 0.75
CHRNE-201ENST00000293780 CCDC85AQ96PX6 553 aaPredicted RBP19.73■□□□□ 0.75
CHRNE-201ENST00000293780 CARMIL3Q8ND23 1372 aa19.72■□□□□ 0.75
CHRNE-201ENST00000293780 HSP90AB3PQ58FF7 597 aa19.72■□□□□ 0.75
CHRNE-201ENST00000293780 CTAGE5O15320 804 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 FOXP2O15409 715 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 KINO60870 393 aaKnown RBP19.71■□□□□ 0.75
CHRNE-201ENST00000293780 CAVIN2O95810 425 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 PPP4R3BQ5MIZ7 849 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 RAB11FIP4Q86YS3 637 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 DHX40Q8IX18 779 aaKnown RBP19.71■□□□□ 0.75
CHRNE-201ENST00000293780 PCDHA7Q9UN72 937 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 FAM160A1Q05DH4 1040 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
CHRNE-201ENST00000293780 CTIFO43310 598 aaKnown RBP19.7■□□□□ 0.74
CHRNE-201ENST00000293780 TNNT1P13805 278 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 CDC25BP30305 580 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 CADPS2Q86UW7 1296 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 CCDC191Q8NCU4 936 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 PKD1L3Q7Z443 1732 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 SARM1Q6SZW1 724 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 LRRC8AQ8IWT6 810 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 GJB4Q9NTQ9 266 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 XIRP1Q702N8 1843 aaKnown RBP19.7■□□□□ 0.74
CHRNE-201ENST00000293780 LAMB4A4D0S4 1761 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 DCCP43146 1447 aa19.7■□□□□ 0.74
CHRNE-201ENST00000293780 A0A1B0GVL5 298 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 BECN2A8MW95 431 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 SCARF1Q14162 830 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 ATP2B3Q16720 1220 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 WASHC4Q2M389 1173 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 CEP126Q9P2H0 1117 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 TJP1Q07157 1748 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 POLR3DP05423 398 aaPredicted RBP19.69■□□□□ 0.74
CHRNE-201ENST00000293780 TPD52L1Q16890 204 aaPredicted RBP19.69■□□□□ 0.74
CHRNE-201ENST00000293780 CLIC4Q9Y696 253 aa19.69■□□□□ 0.74
CHRNE-201ENST00000293780 CIAO1O76071 339 aa19.68■□□□□ 0.74
CHRNE-201ENST00000293780 CBX1P83916 185 aa19.68■□□□□ 0.74
CHRNE-201ENST00000293780 XAGE2Q96GT9 111 aa19.68■□□□□ 0.74
CHRNE-201ENST00000293780 FGAP02671 866 aa19.68■□□□□ 0.74
CHRNE-201ENST00000293780 TTC39AQ5SRH9 613 aa19.68■□□□□ 0.74
CHRNE-201ENST00000293780 GORABQ5T7V8 394 aa19.68■□□□□ 0.74
CHRNE-201ENST00000293780 ATL3Q6DD88 541 aa19.68■□□□□ 0.74
CHRNE-201ENST00000293780 PDCL2Q8N4E4 241 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms