RNA–Protein interactions for RNA: ENST00000293362.7

PSME3-201, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-201ENST00000293362 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
PSME3-201ENST00000293362 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
PSME3-201ENST00000293362 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
PSME3-201ENST00000293362 CCDC102BQ68D86 513 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 FNBP4Q8N3X1 1017 aaPredicted RBP12.13□□□□□ -0.47
PSME3-201ENST00000293362 AFF2P51816 1311 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 NPHP1O15259 732 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
PSME3-201ENST00000293362 GJB2P29033 226 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 BCAMP50895 628 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
PSME3-201ENST00000293362 FERMT3Q86UX7 667 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
PSME3-201ENST00000293362 PANK2Q9BZ23 570 aa12.13□□□□□ -0.47
PSME3-201ENST00000293362 RIC1Q4ADV7 1423 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 LRP6O75581 1613 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 VPS37CA5D8V6 355 aaPredicted RBP12.12□□□□□ -0.47
PSME3-201ENST00000293362 NTSR2O95665 410 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 PIH1D3Q9NQM4 214 aaKnown RBP12.12□□□□□ -0.47
PSME3-201ENST00000293362 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
PSME3-201ENST00000293362 ZMYM1Q5SVZ6 1142 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 SLC9C2Q5TAH2 1124 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 Q6ZUG5 572 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 NEK1Q96PY6 1258 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 DENND2AQ9ULE3 1009 aa12.12□□□□□ -0.47
PSME3-201ENST00000293362 NRAPQ86VF7 1730 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 APPP05067 770 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 SYT1P21579 422 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
PSME3-201ENST00000293362 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 DDX11Q96FC9 970 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
PSME3-201ENST00000293362 ARID3AQ99856 593 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 BRD1O95696 1058 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 PSMA5P28066 241 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 BRF1Q92994 677 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 WWC3Q9ULE0 1092 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 NUP98P52948 1817 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 SEPT12Q8IYM1 358 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 CERKQ8TCT0 537 aa12.11□□□□□ -0.47
PSME3-201ENST00000293362 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
PSME3-201ENST00000293362 CCT2P78371 535 aaKnown RBP12.1□□□□□ -0.47
PSME3-201ENST00000293362 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
PSME3-201ENST00000293362 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
PSME3-201ENST00000293362 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
PSME3-201ENST00000293362 INCENPQ9NQS7 918 aa12.1□□□□□ -0.47
PSME3-201ENST00000293362 GOLGA6L3A6NEY3 463 aa12.1□□□□□ -0.47
PSME3-201ENST00000293362 JAK2O60674 1132 aa12.1□□□□□ -0.47
PSME3-201ENST00000293362 IGHMBP2P38935 993 aaKnown RBP12.1□□□□□ -0.47
PSME3-201ENST00000293362 KDM4AO75164 1064 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 GADD45BO75293 160 aaPredicted RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 CHRNDQ07001 517 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 GPT2Q8TD30 523 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 KCNB2Q92953 911 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 GPAA1O43292 621 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 ZPR1O75312 459 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 GYG1P46976 350 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 RASGRF1Q13972 1273 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 PUM3Q15397 648 aaKnown RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 TM6SF1Q9BZW5 370 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 HMG20BQ9P0W2 317 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 RPAP1Q9BWH6 1393 aaPredicted RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 FOXP2O15409 715 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 FIBPO43427 364 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 STX6O43752 255 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 FGAP02671 866 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 NCOA5Q9HCD5 579 aaKnown RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 HELLSQ9NRZ9 838 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 ABCF2Q9UG63 623 aa12.09□□□□□ -0.47
PSME3-201ENST00000293362 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.09□□□□□ -0.47
PSME3-201ENST00000293362 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
PSME3-201ENST00000293362 PARP10Q53GL7 1025 aa12.08□□□□□ -0.48
PSME3-201ENST00000293362 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
PSME3-201ENST00000293362 NBPF5PQ86XG9 351 aaPredicted RBP12.08□□□□□ -0.48
PSME3-201ENST00000293362 QTRT2Q9H974 415 aaKnown RBP12.08□□□□□ -0.48
PSME3-201ENST00000293362 ZNF532Q9HCE3 1301 aa12.08□□□□□ -0.48
PSME3-201ENST00000293362 E7EWF7 191 aa12.08□□□□□ -0.48
PSME3-201ENST00000293362 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
PSME3-201ENST00000293362 LPIN2Q92539 896 aa12.08□□□□□ -0.48
PSME3-201ENST00000293362 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
PSME3-201ENST00000293362 SRCAPQ6ZRS2 3230 aa12.07□□□□□ -0.48
PSME3-201ENST00000293362 KLRK1P26718 216 aa12.07□□□□□ -0.48
PSME3-201ENST00000293362 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms