RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
ZIC3-201ENST00000287538 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
ZIC3-201ENST00000287538 KBTBD3Q8NAB2 608 aa15.2■□□□□ 0.02
ZIC3-201ENST00000287538 HAUS7Q99871 368 aa15.2■□□□□ 0.02
ZIC3-201ENST00000287538 ABCF2Q9UG63 623 aa15.2■□□□□ 0.02
ZIC3-201ENST00000287538 AKAP2Q9Y2D5 859 aa15.2■□□□□ 0.02
ZIC3-201ENST00000287538 IL6STP40189 918 aaPredicted RBP15.2■□□□□ 0.02
ZIC3-201ENST00000287538 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
ZIC3-201ENST00000287538 SH3TC1Q8TE82 1336 aa15.2■□□□□ 0.02
ZIC3-201ENST00000287538 GTF2F1P35269 517 aaKnown RBP eCLIP15.19■□□□□ 0.02
ZIC3-201ENST00000287538 ROBO1Q9Y6N7 1651 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 SPATA31A5Q5VU36 1347 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 SPATA31A7Q8IWB4 1347 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 PDE8AO60658 829 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 GJB2P29033 226 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 INTS5Q6P9B9 1019 aaKnown RBP15.19■□□□□ 0.02
ZIC3-201ENST00000287538 BCL9O00512 1426 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 WTIPA6NIX2 430 aaPredicted RBP15.19■□□□□ 0.02
ZIC3-201ENST00000287538 PSMA5P28066 241 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 PHKA1P46020 1223 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 MAP4K1Q92918 833 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 BRF1Q92994 677 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
ZIC3-201ENST00000287538 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
ZIC3-201ENST00000287538 ME3Q16798 604 aa15.18■□□□□ 0.02
ZIC3-201ENST00000287538 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
ZIC3-201ENST00000287538 CHMP4CQ96CF2 233 aa15.18■□□□□ 0.02
ZIC3-201ENST00000287538 VPS37DQ86XT2 251 aa15.18■□□□□ 0.02
ZIC3-201ENST00000287538 U2AF2P26368 475 aaKnown RBP eCLIP15.18■□□□□ 0.02
ZIC3-201ENST00000287538 CEBPZQ03701 1054 aaKnown RBP15.18■□□□□ 0.02
ZIC3-201ENST00000287538 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
ZIC3-201ENST00000287538 TPCN1Q9ULQ1 816 aa15.18■□□□□ 0.02
ZIC3-201ENST00000287538 EP400Q96L91 3159 aa15.17■□□□□ 0.02
ZIC3-201ENST00000287538 IGHMBP2P38935 993 aaKnown RBP15.17■□□□□ 0.02
ZIC3-201ENST00000287538 USPL1Q5W0Q7 1092 aa15.17■□□□□ 0.02
ZIC3-201ENST00000287538 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
ZIC3-201ENST00000287538 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
ZIC3-201ENST00000287538 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
ZIC3-201ENST00000287538 Q6ZUG5 572 aa15.17■□□□□ 0.02
ZIC3-201ENST00000287538 ZPR1O75312 459 aa15.16■□□□□ 0.02
ZIC3-201ENST00000287538 CYP21A2P08686 494 aa15.16■□□□□ 0.02
ZIC3-201ENST00000287538 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 LARP1BQ659C4 914 aaKnown RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 ZNF771Q7L3S4 317 aaPredicted RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
ZIC3-201ENST00000287538 CCNL1Q9UK58 526 aaPredicted RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 RNF113AO15541 343 aaKnown RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
ZIC3-201ENST00000287538 SLC4A8Q2Y0W8 1093 aa15.16■□□□□ 0.02
ZIC3-201ENST00000287538 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 M0R2C6 588 aa15.16■□□□□ 0.02
ZIC3-201ENST00000287538 PLCB2Q00722 1185 aa15.16■□□□□ 0.02
ZIC3-201ENST00000287538 RRP12Q5JTH9 1297 aaKnown RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 CGNQ9P2M7 1197 aaKnown RBP15.16■□□□□ 0.02
ZIC3-201ENST00000287538 BCAMP50895 628 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 LINC00116Q8NCU8 138 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 ADCY5O95622 1261 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 SYT1P21579 422 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 GPHNQ9NQX3 736 aaPredicted RBP15.15■□□□□ 0.02
ZIC3-201ENST00000287538 HSPA1LP34931 641 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
ZIC3-201ENST00000287538 TFIP11Q9UBB9 837 aaKnown RBP15.15■□□□□ 0.02
ZIC3-201ENST00000287538 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
ZIC3-201ENST00000287538 MCAMP43121 646 aa15.14■□□□□ 0.01
ZIC3-201ENST00000287538 APOBRQ0VD83 1088 aa15.14■□□□□ 0.01
ZIC3-201ENST00000287538 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
ZIC3-201ENST00000287538 NCOA5Q9HCD5 579 aaKnown RBP15.14■□□□□ 0.01
ZIC3-201ENST00000287538 KCPQ6ZWJ8 1503 aa15.14■□□□□ 0.01
ZIC3-201ENST00000287538 CHAF1AQ13111 956 aaPredicted RBP15.14■□□□□ 0.01
ZIC3-201ENST00000287538 STX6O43752 255 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 JAK2O60674 1132 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 FAM184AQ8NB25 1140 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 SMARCC1Q92922 1105 aaPredicted RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 ZNF609O15014 1411 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 AFDNP55196 1824 aaKnown RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 PDE8BO95263 885 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 HSPD1P10809 573 aaKnown RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 TRIM28Q13263 835 aaKnown RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 CCDC152Q4G0S7 254 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 ZNF652Q9Y2D9 606 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 RIPOR2Q9Y4F9 1068 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 MAST3O60307 1309 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 RIOK3O14730 519 aaKnown RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 GADD45BO75293 160 aaPredicted RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 TTC14Q96N46 770 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 TMEM51Q9NW97 253 aa15.13■□□□□ 0.01
ZIC3-201ENST00000287538 THRAP3Q9Y2W1 955 aaKnown RBP15.13■□□□□ 0.01
ZIC3-201ENST00000287538 H3BQV1 296 aa15.12■□□□□ 0.01
ZIC3-201ENST00000287538 GYG1P46976 350 aa15.12■□□□□ 0.01
ZIC3-201ENST00000287538 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
ZIC3-201ENST00000287538 CCDC144CPQ8IYA2 1237 aa15.12■□□□□ 0.01
ZIC3-201ENST00000287538 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
ZIC3-201ENST00000287538 CAMTA2O94983 1202 aa15.12■□□□□ 0.01
ZIC3-201ENST00000287538 RXRAP19793 462 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms