RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 CWC15Q9P013 229 aaKnown RBP17.71■□□□□ 0.43
USP25-201ENST00000285679 A0A087WZG4 1122 aa17.71■□□□□ 0.43
USP25-201ENST00000285679 HOXC9P31274 260 aa17.71■□□□□ 0.43
USP25-201ENST00000285679 GYS2P54840 703 aa17.71■□□□□ 0.43
USP25-201ENST00000285679 CERS3Q8IU89 383 aa17.71■□□□□ 0.43
USP25-201ENST00000285679 ELP1O95163 1332 aa17.71■□□□□ 0.43
USP25-201ENST00000285679 CD163L1Q9NR16 1453 aa17.71■□□□□ 0.42
USP25-201ENST00000285679 TOB2Q14106 344 aaPredicted RBP17.71■□□□□ 0.42
USP25-201ENST00000285679 MCMDC2Q4G0Z9 681 aa17.71■□□□□ 0.42
USP25-201ENST00000285679 CCDC191Q8NCU4 936 aa17.71■□□□□ 0.42
USP25-201ENST00000285679 SETD1BQ9UPS6 1966 aaKnown RBP17.7■□□□□ 0.42
USP25-201ENST00000285679 KLF18A0A0U1RQI7 1052 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 SPTLC2O15270 562 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 MRFAP1L1Q96HT8 127 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 LZTFL1Q9NQ48 299 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 GJB4Q9NTQ9 266 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.7■□□□□ 0.423e-7■□□□□ 11.2
USP25-201ENST00000285679 CLCN6P51797 869 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 PPARDQ03181 441 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 SPECC1Q5M775 1068 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 SYKP43405 635 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 TIMM10P62072 90 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 ARFGAP3Q9NP61 516 aa17.7■□□□□ 0.42
USP25-201ENST00000285679 ZSCAN12O43309 604 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 DHX16O60231 1041 aaKnown RBP17.69■□□□□ 0.42
USP25-201ENST00000285679 XAGE3Q8WTP9 111 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 ROBO2Q9HCK4 1378 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 CBFA2T2O43439 604 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 NDUFA8P51970 172 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 EIF4A1P60842 406 aaKnown RBP17.69■□□□□ 0.42
USP25-201ENST00000285679 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 CNNM3Q8NE01 707 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 PPP1R13BQ96KQ4 1090 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 GOLPH3LQ9H4A5 285 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
USP25-201ENST00000285679 FANCCQ00597 558 aa17.69■□□□□ 0.42
USP25-201ENST00000285679 DHX32Q7L7V1 743 aaKnown RBP17.69■□□□□ 0.42
USP25-201ENST00000285679 TECPR2O15040 1411 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 EPB41L2O43491 1005 aaKnown RBP17.68■□□□□ 0.42
USP25-201ENST00000285679 POLA2Q14181 598 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 KIF4BQ2VIQ3 1234 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 RAPGEF4Q8WZA2 1011 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 CYP21A2P08686 494 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 SLFN14P0C7P3 912 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 PCDHA7Q9UN72 937 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 ADAMTS13Q76LX8 1427 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 LINS1Q8NG48 757 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 UBR1Q8IWV7 1749 aa17.68■□□□□ 0.42
USP25-201ENST00000285679 SASH1O94885 1247 aa17.67■□□□□ 0.42
USP25-201ENST00000285679 OAS2P29728 719 aaKnown RBP17.67■□□□□ 0.42
USP25-201ENST00000285679 HNRNPH2P55795 449 aaKnown RBP17.67■□□□□ 0.42
USP25-201ENST00000285679 ZC3H6P61129 1189 aaKnown RBP17.67■□□□□ 0.42
USP25-201ENST00000285679 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
USP25-201ENST00000285679 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
USP25-201ENST00000285679 TAF5LO75529 589 aa17.67■□□□□ 0.42
USP25-201ENST00000285679 ATP1A3P13637 1013 aa17.67■□□□□ 0.42
USP25-201ENST00000285679 RESTQ13127 1097 aa17.67■□□□□ 0.42
USP25-201ENST00000285679 DESI2Q9BSY9 194 aa17.66■□□□□ 0.42
USP25-201ENST00000285679 MORC2Q9Y6X9 1032 aaPredicted RBP17.66■□□□□ 0.42
USP25-201ENST00000285679 ZNF202O95125 648 aa17.66■□□□□ 0.42
USP25-201ENST00000285679 TPM1P09493 284 aa17.66■□□□□ 0.42
USP25-201ENST00000285679 PPFIBP1Q86W92 1011 aa17.66■□□□□ 0.42
USP25-201ENST00000285679 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
USP25-201ENST00000285679 JMYQ8N9B5 988 aa17.66■□□□□ 0.42
USP25-201ENST00000285679 VPS18Q9P253 973 aa17.66■□□□□ 0.42
USP25-201ENST00000285679 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
USP25-201ENST00000285679 JAKMIP3Q5VZ66 844 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 LMBR1LQ6UX01 489 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 SRRTQ9BXP5 876 aaKnown RBP17.65■□□□□ 0.42
USP25-201ENST00000285679 CLIC4Q9Y696 253 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 ALDH1L1O75891 902 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 RHOXF2BP0C7M4 288 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 TTC39AQ5SRH9 613 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 RHOXF2Q9BQY4 288 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 KIAA1468Q9P260 1216 aa17.65■□□□□ 0.42
USP25-201ENST00000285679 HOOK1Q9UJC3 728 aaKnown RBP17.65■□□□□ 0.42
USP25-201ENST00000285679 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
USP25-201ENST00000285679 IMMTQ16891 758 aaKnown RBP17.65■□□□□ 0.42
USP25-201ENST00000285679 ADKP55263 362 aaKnown RBP17.64■□□□□ 0.42
USP25-201ENST00000285679 ETF1P62495 437 aaKnown RBP17.64■□□□□ 0.42
USP25-201ENST00000285679 SAFBQ15424 915 aaKnown RBP eCLIP17.64■□□□□ 0.42
USP25-201ENST00000285679 NBPF6Q5VWK0 638 aa17.64■□□□□ 0.42
USP25-201ENST00000285679 LRRN4CLQ8ND94 238 aa17.64■□□□□ 0.42
USP25-201ENST00000285679 NBPF4Q96M43 638 aa17.64■□□□□ 0.42
USP25-201ENST00000285679 RABEP2Q9H5N1 569 aa17.64■□□□□ 0.42
USP25-201ENST00000285679 CRB1P82279 1406 aa17.64■□□□□ 0.42
USP25-201ENST00000285679 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
USP25-201ENST00000285679 CAPN2P17655 700 aa17.64■□□□□ 0.41
USP25-201ENST00000285679 AKAP17AQ02040 695 aaKnown RBP17.64■□□□□ 0.41
USP25-201ENST00000285679 IQCB1Q15051 598 aa17.64■□□□□ 0.41
USP25-201ENST00000285679 SETD1AO15047 1707 aaKnown RBP17.64■□□□□ 0.41
USP25-201ENST00000285679 KCNG4Q8TDN1 519 aa17.64■□□□□ 0.41
USP25-201ENST00000285679 CPS1P31327 1500 aa17.64■□□□□ 0.41
USP25-201ENST00000285679 STX17P56962 302 aa17.63■□□□□ 0.41
USP25-201ENST00000285679 AXDND1Q5T1B0 1012 aaPredicted RBP17.63■□□□□ 0.41
USP25-201ENST00000285679 TRMT44Q8IYL2 757 aaKnown RBP17.63■□□□□ 0.41
USP25-201ENST00000285679 PCMTD1Q96MG8 357 aaPredicted RBP17.63■□□□□ 0.41
USP25-201ENST00000285679 SBNO1A3KN83 1393 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms