RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ALDH1L1O75891 902 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 NOS2P35228 1153 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 GUCY2FP51841 1108 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 FCGRTP55899 365 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 FOXD4Q12950 439 aaPredicted RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 NBPF1Q3BBV0 1214 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 PERM1Q5SV97 790 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 TPTE2Q6XPS3 522 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 SYNPOQ8N3V7 929 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 VPS37AQ8NEZ2 397 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 TRPM4Q8TD43 1214 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 PURBQ96QR8 312 aaKnown RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 SALL2Q9Y467 1007 aaPredicted RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 GLI2P10070 1586 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 C3orf80F5H4A9 247 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 ZBTB39O15060 712 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 POLR3DP05423 398 aaPredicted RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 CLUL1Q15846 466 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 SLC27A3Q5K4L6 730 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 SYCP2LQ5T4T6 812 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 ZSWIM2Q8NEG5 633 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 CNKSR1Q969H4 720 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 L3MBTL2Q969R5 705 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 MIR1-1HGQ9H1L0 117 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 CAAP1Q9H8G2 361 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 PUF60Q9UHX1 559 aaKnown RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 PPT2Q9UMR5 302 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 BCORL1Q5H9F3 1711 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 IQGAP2Q13576 1575 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 SMAD7O15105 426 aaKnown RBP3.4□□□□□ -1.86
CHD1-201ENST00000284049 MASP1P48740 699 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 GRAMD1BQ3KR37 738 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 IQSEC1Q6DN90 963 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 TSR2Q969E8 191 aaKnown RBP3.4□□□□□ -1.86
CHD1-201ENST00000284049 C8orf48Q96LL4 319 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 FAM129BQ96TA1 746 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 NPHS2Q9NP85 383 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 GRIN2AQ12879 1464 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 ADCY10Q96PN6 1610 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 BIRC3Q13489 604 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 RRP12Q5JTH9 1297 aaKnown RBP3.4□□□□□ -1.86
CHD1-201ENST00000284049 JARID2Q92833 1246 aaPredicted RBP3.4□□□□□ -1.86
CHD1-201ENST00000284049 COL26A1Q96A83 441 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 ELP3Q9H9T3 547 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 MRFAP1Q9Y605 127 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 KIF27Q86VH2 1401 aa3.4□□□□□ -1.86
CHD1-201ENST00000284049 FZD6O60353 706 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 IMPDH2P12268 514 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 CALRP27797 417 aaKnown RBP3.4□□□□□ -1.87
CHD1-201ENST00000284049 MYO1HQ8N1T3 1032 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 PGBD3Q8N328 593 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 TEX19Q8NA77 164 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 MFSD3Q96ES6 412 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 NLRP3Q96P20 1036 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 CDC5LQ99459 802 aaKnown RBP3.4□□□□□ -1.87
CHD1-201ENST00000284049 SCUBE2Q9NQ36 999 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 MAPKBP1O60336 1514 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 SART3Q15020 963 aaKnown RBP3.4□□□□□ -1.87
CHD1-201ENST00000284049 INTS6LQ5JSJ4 861 aaKnown RBP3.4□□□□□ -1.87
CHD1-201ENST00000284049 COX20Q5RI15 118 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 PASD1Q8IV76 773 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 CEP63Q96MT8 703 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 COPRSQ9NQ92 184 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 FAM135AQ9P2D6 1515 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 IQCA1LA6NCM1 817 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 RASSF10A6NK89 507 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 AMPD3Q01432 767 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 RTN1Q16799 776 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 DDX46Q7L014 1031 aaKnown RBP3.4□□□□□ -1.87
CHD1-201ENST00000284049 ZSWIM6Q9HCJ5 1215 aa3.4□□□□□ -1.87
CHD1-201ENST00000284049 SCHIP1Q9P0W5 487 aaPredicted RBP3.4□□□□□ -1.87
CHD1-201ENST00000284049 UBAP1LF5GYI3 381 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 PSEN2P49810 448 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 HLTFQ14527 1009 aaKnown RBP eCLIP3.39□□□□□ -1.873e-10■■■■□ 20.8
CHD1-201ENST00000284049 SAMD3Q8N6K7 520 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 WDR66Q8TBY9 1149 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 PICK1Q9NRD5 415 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 DACH1Q9UI36 760 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 AXIN2Q9Y2T1 843 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 RABGAP1Q9Y3P9 1069 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 GAPVD1Q14C86 1478 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 FSHRP23945 695 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 MYRIPQ8NFW9 859 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 RHPN1Q8TCX5 695 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 EPS8L3Q8TE67 593 aaKnown RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 THAP3Q8WTV1 239 aaPredicted RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 CDK5RAP3Q96JB5 506 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD1-201ENST00000284049 SRA1Q9HD15 236 aaKnown RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 PGPEP1Q9NXJ5 209 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 PARP3Q9Y6F1 533 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 WDR7Q9Y4E6 1490 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 ABCA8O94911 1581 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 SHTN1A0MZ66 631 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 PDGFAP04085 211 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 TMTC2Q8N394 836 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 USP31Q70CQ4 1352 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 AMOTL1Q8IY63 956 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 USP7Q93009 1102 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 EHD4Q9H223 541 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms