RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 USP26Q9BXU7 913 aa16.1■□□□□ 0.17
ACER3-201ENST00000278544 CPA1P15085 419 aa16.09■□□□□ 0.17
ACER3-201ENST00000278544 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
ACER3-201ENST00000278544 SLKQ9H2G2 1235 aaPredicted RBP16.09■□□□□ 0.17
ACER3-201ENST00000278544 MYH3P11055 1940 aa16.09■□□□□ 0.17
ACER3-201ENST00000278544 SPEF2Q9C093 1822 aa16.09■□□□□ 0.17
ACER3-201ENST00000278544 RREB1Q92766 1687 aa16.09■□□□□ 0.17
ACER3-201ENST00000278544 CYP2E1P05181 493 aaPredicted RBP16.08■□□□□ 0.16
ACER3-201ENST00000278544 REC8O95072 547 aa16.08■□□□□ 0.16
ACER3-201ENST00000278544 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
ACER3-201ENST00000278544 UFL1O94874 794 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 CD2BP2O95400 341 aaKnown RBP16.07■□□□□ 0.16
ACER3-201ENST00000278544 GRAPQ13588 217 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 GRAPLQ8TC17 118 aaPredicted RBP16.07■□□□□ 0.16
ACER3-201ENST00000278544 PIH1D3Q9NQM4 214 aaKnown RBP16.07■□□□□ 0.16
ACER3-201ENST00000278544 DDX60Q8IY21 1712 aaKnown RBP16.07■□□□□ 0.16
ACER3-201ENST00000278544 C2CD5Q86YS7 1000 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 SGSM2O43147 1006 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 GPSM2P81274 684 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
ACER3-201ENST00000278544 FLAD1Q8NFF5 587 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 AOX1Q06278 1338 aa16.07■□□□□ 0.16
ACER3-201ENST00000278544 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 A0A0G2JLW4 131 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 SLC9C2Q5TAH2 1124 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 TCEANC2Q96MN5 208 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 FGFR2P21802 821 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 SLC4A8Q2Y0W8 1093 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 ERICH6Q7L0X2 663 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 KBTBD3Q8NAB2 608 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 MIGA1Q8NAN2 632 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
ACER3-201ENST00000278544 GPR108Q9NPR9 543 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 COL9A3Q14050 684 aaPredicted RBP16.06■□□□□ 0.16
ACER3-201ENST00000278544 LRP2BPQ9P2M1 347 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 TAF6LQ9Y6J9 622 aa16.06■□□□□ 0.16
ACER3-201ENST00000278544 SPATA5Q8NB90 893 aa16.05■□□□□ 0.16
ACER3-201ENST00000278544 ZNF804BA4D1E1 1349 aa16.05■□□□□ 0.16
ACER3-201ENST00000278544 FAM84BQ96KN1 310 aaPredicted RBP16.05■□□□□ 0.16
ACER3-201ENST00000278544 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
ACER3-201ENST00000278544 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
ACER3-201ENST00000278544 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
ACER3-201ENST00000278544 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
ACER3-201ENST00000278544 DOK7Q18PE1 504 aa16.04■□□□□ 0.16
ACER3-201ENST00000278544 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
ACER3-201ENST00000278544 TNS1Q9HBL0 1735 aaKnown RBP16.04■□□□□ 0.16
ACER3-201ENST00000278544 APPP05067 770 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 HAND2P61296 217 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 OSBP2Q969R2 916 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 KIF2CQ99661 725 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
ACER3-201ENST00000278544 SRGNP10124 158 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 M0R2C6 588 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
ACER3-201ENST00000278544 UPF1Q92900 1129 aaKnown RBP eCLIP16.03■□□□□ 0.16
ACER3-201ENST00000278544 PPEF1O14829 653 aaPredicted RBP16.02■□□□□ 0.16
ACER3-201ENST00000278544 TBC1D2Q9BYX2 928 aa16.02■□□□□ 0.16
ACER3-201ENST00000278544 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
ACER3-201ENST00000278544 F8W031 263 aaPredicted RBP16.02■□□□□ 0.16
ACER3-201ENST00000278544 H0YIN7 160 aa16.02■□□□□ 0.16
ACER3-201ENST00000278544 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
ACER3-201ENST00000278544 NEK4P51957 841 aa16.02■□□□□ 0.16
ACER3-201ENST00000278544 TTLL5Q6EMB2 1281 aa16.02■□□□□ 0.16
ACER3-201ENST00000278544 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
ACER3-201ENST00000278544 LSG1Q9H089 658 aaKnown RBP16.01■□□□□ 0.15
ACER3-201ENST00000278544 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
ACER3-201ENST00000278544 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
ACER3-201ENST00000278544 C21orf2O43822 256 aa16.01■□□□□ 0.15
ACER3-201ENST00000278544 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
ACER3-201ENST00000278544 RNF113AO15541 343 aaKnown RBP16.01■□□□□ 0.15
ACER3-201ENST00000278544 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
ACER3-201ENST00000278544 MXD3Q9BW11 206 aa16.01■□□□□ 0.15
ACER3-201ENST00000278544 TAOK2Q9UL54 1235 aa16.01■□□□□ 0.15
ACER3-201ENST00000278544 AK9Q5TCS8 1911 aa16■□□□□ 0.15
ACER3-201ENST00000278544 G3V3G9 751 aa16■□□□□ 0.15
ACER3-201ENST00000278544 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
ACER3-201ENST00000278544 PDE6BP35913 854 aa16■□□□□ 0.15
ACER3-201ENST00000278544 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
ACER3-201ENST00000278544 TUBGCP6Q96RT7 1819 aa16■□□□□ 0.15
ACER3-201ENST00000278544 UBE4AQ14139 1066 aa16■□□□□ 0.15
ACER3-201ENST00000278544 ADCK5Q3MIX3 580 aa16■□□□□ 0.15
ACER3-201ENST00000278544 GGA1Q9UJY5 639 aa16■□□□□ 0.15
ACER3-201ENST00000278544 PRDX5P30044 214 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 MCMDC2Q4G0Z9 681 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 ANKRD2Q9GZV1 360 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 MAST3O60307 1309 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
ACER3-201ENST00000278544 GRIK5Q16478 980 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 LRRC2Q9BYS8 371 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 DBNDD1Q9H9R9 158 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 KCNQ5Q9NR82 932 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
ACER3-201ENST00000278544 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
ACER3-201ENST00000278544 CHST3Q7LGC8 479 aa15.98■□□□□ 0.15
ACER3-201ENST00000278544 ARMT1Q9H993 441 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms