RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 NAT10Q9H0A0 1025 aaKnown RBP15.04■□□□□ -0
COL8A1-202ENST00000273342 PDIA4P13667 645 aaKnown RBP15.03■□□□□ -0
COL8A1-202ENST00000273342 MARCKSP29966 332 aaPredicted RBP15.03■□□□□ -0
COL8A1-202ENST00000273342 UBE3BQ7Z3V4 1068 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 MRPS27Q92552 414 aaKnown RBP15.03■□□□□ -0
COL8A1-202ENST00000273342 TECPR2O15040 1411 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 GNL2Q13823 731 aaKnown RBP15.03■□□□□ -0
COL8A1-202ENST00000273342 TIGD1Q96MW7 591 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 ZNF396Q96N95 335 aaPredicted RBP15.03■□□□□ -0
COL8A1-202ENST00000273342 BABAM1Q9NWV8 329 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 MCMDC2Q4G0Z9 681 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 HSP90AB3PQ58FF7 597 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 UBXN4Q92575 508 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 CCDC34Q96HJ3 373 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 FHOD1Q9Y613 1164 aa15.03■□□□□ -0
COL8A1-202ENST00000273342 ZNF609O15014 1411 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 ADAMTS13Q76LX8 1427 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 BMS1Q14692 1282 aaKnown RBP15.02■□□□□ -0
COL8A1-202ENST00000273342 TNNI3KQ59H18 835 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 TAF3Q5VWG9 929 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 COPS6Q7L5N1 327 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 MNS1Q8NEH6 495 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 UTP14AQ9BVJ6 771 aaKnown RBP15.02■□□□□ -0
COL8A1-202ENST00000273342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.02■□□□□ -0
COL8A1-202ENST00000273342 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
COL8A1-202ENST00000273342 FPGT-TNNI3KV9GXZ4 949 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 PTPRUQ92729 1446 aa15.02■□□□□ -0
COL8A1-202ENST00000273342 PFKFB2O60825 505 aa15.02□□□□□ -0.01
COL8A1-202ENST00000273342 PNMA6AP0CW24 399 aaPredicted RBP15.02□□□□□ -0.01
COL8A1-202ENST00000273342 GYS2P54840 703 aa15.02□□□□□ -0.01
COL8A1-202ENST00000273342 TIMM10P62072 90 aa15.02□□□□□ -0.01
COL8A1-202ENST00000273342 DHX32Q7L7V1 743 aaKnown RBP15.02□□□□□ -0.01
COL8A1-202ENST00000273342 FMR1NBQ8N0W7 255 aaPredicted RBP15.02□□□□□ -0.01
COL8A1-202ENST00000273342 CARD6Q9BX69 1037 aa15.02□□□□□ -0.01
COL8A1-202ENST00000273342 CEMIPQ8WUJ3 1361 aa15.02□□□□□ -0.01
COL8A1-202ENST00000273342 RNMTO43148 476 aaKnown RBP15.01□□□□□ -0.01
COL8A1-202ENST00000273342 DDX58O95786 925 aaKnown RBP15.01□□□□□ -0.01
COL8A1-202ENST00000273342 GSDMDP57764 484 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 SMARCC2Q8TAQ2 1214 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 DPF2Q92785 391 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 KIAA1468Q9P260 1216 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 HNRNPH2P55795 449 aaKnown RBP15.01□□□□□ -0.01
COL8A1-202ENST00000273342 ZC3H6P61129 1189 aaKnown RBP15.01□□□□□ -0.01
COL8A1-202ENST00000273342 NEXNQ0ZGT2 675 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 ZSWIM4Q9H7M6 989 aa15.01□□□□□ -0.01
COL8A1-202ENST00000273342 SLC3A2P08195 630 aaKnown RBP15.01□□□□□ -0.01
COL8A1-202ENST00000273342 SERPINC1P01008 464 aa15□□□□□ -0.01
COL8A1-202ENST00000273342 PLA2G4AP47712 749 aa15□□□□□ -0.01
COL8A1-202ENST00000273342 TSGA10IPQ3SY00 556 aa15□□□□□ -0.01
COL8A1-202ENST00000273342 PDIA3P30101 505 aaKnown RBP15□□□□□ -0.01
COL8A1-202ENST00000273342 CFAP100Q494V2 611 aa15□□□□□ -0.01
COL8A1-202ENST00000273342 PLEKHO1Q53GL0 409 aaPredicted RBP15□□□□□ -0.01
COL8A1-202ENST00000273342 AKAP4Q5JQC9 854 aa15□□□□□ -0.01
COL8A1-202ENST00000273342 NAA16Q6N069 864 aaPredicted RBP15□□□□□ -0.01
COL8A1-202ENST00000273342 TMCO3Q6UWJ1 677 aa15□□□□□ -0.01
COL8A1-202ENST00000273342 ALDH8A1Q9H2A2 487 aaPredicted RBP15□□□□□ -0.01
COL8A1-202ENST00000273342 NEURL1BA8MQ27 555 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 FANCGO15287 622 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 HOXB7P09629 217 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 FDPSP14324 419 aaKnown RBP14.99□□□□□ -0.01
COL8A1-202ENST00000273342 H2AFXP16104 143 aaPredicted RBP14.99□□□□□ -0.01
COL8A1-202ENST00000273342 PDILTQ8N807 584 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 SNRKQ9NRH2 765 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 HDAC5Q9UQL6 1122 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 E7EWF7 191 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 ATP5JP18859 108 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 ST5P78524 1137 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 FANCCQ00597 558 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 GCKRQ14397 625 aa14.99□□□□□ -0.01
COL8A1-202ENST00000273342 TMEM232C9JQI7 657 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 ZNF202O95125 648 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 RXRAP19793 462 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 PTPN12Q05209 780 aaKnown RBP14.98□□□□□ -0.01
COL8A1-202ENST00000273342 OSBPL5Q9H0X9 879 aaPredicted RBP14.98□□□□□ -0.01
COL8A1-202ENST00000273342 TEX35Q5T0J7 233 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 IP6K1Q92551 441 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 NRDCO43847 1150 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 AIFM3Q96NN9 605 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 L2HGDHQ9H9P8 463 aa14.98□□□□□ -0.01
COL8A1-202ENST00000273342 ADGRL3Q9HAR2 1447 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 SPTLC2O15270 562 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 UBASH3AP57075 661 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 ETF1P62495 437 aaKnown RBP14.97□□□□□ -0.01
COL8A1-202ENST00000273342 ADALQ6DHV7 355 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 SYNE3Q6ZMZ3 975 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 LINC00301Q8NCQ3 95 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL8A1-202ENST00000273342 CARMIL3Q8ND23 1372 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 CAPN2P17655 700 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 CCDC150Q8NCX0 1101 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
COL8A1-202ENST00000273342 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 FAM53CQ9NYF3 392 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 FMN2Q9NZ56 1722 aa14.97□□□□□ -0.01
COL8A1-202ENST00000273342 NWD1Q149M9 1564 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms