RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.37
PRUNE1-201ENST00000271620 MCM5P33992 734 aa12.76□□□□□ -0.37
PRUNE1-201ENST00000271620 PIGBQ92521 554 aa12.76□□□□□ -0.37
PRUNE1-201ENST00000271620 ALDH8A1Q9H2A2 487 aaPredicted RBP12.76□□□□□ -0.37
PRUNE1-201ENST00000271620 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRUNE1-201ENST00000271620 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
PRUNE1-201ENST00000271620 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
PRUNE1-201ENST00000271620 ELP1O95163 1332 aa12.76□□□□□ -0.37
PRUNE1-201ENST00000271620 SNAP23O00161 211 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 USP28Q96RU2 1077 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 CBX8Q9HC52 389 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 PYCARDQ9ULZ3 195 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 CPDO75976 1380 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 PFKFB2O60825 505 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 EXOSC10Q01780 885 aaKnown RBP12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 KCNF1Q9H3M0 494 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 NRBP1Q9UHY1 535 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 ZNF335Q9H4Z2 1342 aaPredicted RBP12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 FOXP2O15409 715 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 FGAP02671 866 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 POLR3DP05423 398 aaPredicted RBP12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 DRC7Q8IY82 874 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 HELBQ8NG08 1087 aaPredicted RBP12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 DSCC1Q9BVC3 393 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 GREM2Q9H772 168 aa12.75□□□□□ -0.37
PRUNE1-201ENST00000271620 RXRAP19793 462 aa12.74□□□□□ -0.37
PRUNE1-201ENST00000271620 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
PRUNE1-201ENST00000271620 NKX2-3Q8TAU0 364 aa12.74□□□□□ -0.37
PRUNE1-201ENST00000271620 PTGS1P23219 599 aa12.74□□□□□ -0.37
PRUNE1-201ENST00000271620 METTL24Q5JXM2 366 aa12.74□□□□□ -0.37
PRUNE1-201ENST00000271620 TBC1D2BQ9UPU7 963 aa12.74□□□□□ -0.37
PRUNE1-201ENST00000271620 PALLDQ8WX93 1383 aa12.74□□□□□ -0.37
PRUNE1-201ENST00000271620 HMGB1P09429 215 aaKnown RBP12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 ME1P48163 572 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 ZNF165P49910 485 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 LRMPQ12912 555 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 SASS6Q6UVJ0 657 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 SMARCC2Q8TAQ2 1214 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 PIBF1Q8WXW3 757 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 TRIM5Q9C035 493 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 GOLPH3LQ9H4A5 285 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 GLI3P10071 1580 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 COL5A2P05997 1499 aaPredicted RBP12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 ITGA6P23229 1130 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 BCL11BQ9C0K0 894 aaPredicted RBP12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 CLSTN2Q9H4D0 955 aa12.73□□□□□ -0.37
PRUNE1-201ENST00000271620 IDH1O75874 414 aaKnown RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 APPP05067 770 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 CCAR1Q8IX12 1150 aaKnown RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 CFAP45Q9UL16 551 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 RRP9O43818 475 aaKnown RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 FDPSP14324 419 aaKnown RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 MCAMP43121 646 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 CNNM1Q9NRU3 951 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 CCDC186Q7Z3E2 898 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 CCDC144CPQ8IYA2 1237 aa12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
PRUNE1-201ENST00000271620 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 KLF18A0A0U1RQI7 1052 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 GPAA1O43292 621 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 PRC1O43663 620 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 CIAO1O76071 339 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 ATP2B3Q16720 1220 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 SLC9C2Q5TAH2 1124 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
PRUNE1-201ENST00000271620 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.38
PRUNE1-201ENST00000271620 IMMTQ16891 758 aaKnown RBP12.71□□□□□ -0.38
PRUNE1-201ENST00000271620 C11orf57Q6ZUT1 292 aaPredicted RBP12.71□□□□□ -0.38
PRUNE1-201ENST00000271620 ZBTB38Q8NAP3 1195 aaPredicted RBP12.71□□□□□ -0.38
PRUNE1-201ENST00000271620 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.38
PRUNE1-201ENST00000271620 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.38
PRUNE1-201ENST00000271620 DCCP43146 1447 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 A0A1B0GVL5 298 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 RFX7Q2KHR2 1363 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 PKD1L3Q7Z443 1732 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 AKAP2Q9Y2D5 859 aa12.7□□□□□ -0.38
PRUNE1-201ENST00000271620 STARD3NLO95772 234 aa12.69□□□□□ -0.38
PRUNE1-201ENST00000271620 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms