RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 SWAP70Q9UH65 585 aa14.24□□□□□ -0.13
CDH11-201ENST00000268603 ARID4AP29374 1257 aaPredicted RBP14.23□□□□□ -0.13
CDH11-201ENST00000268603 GSDMDP57764 484 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 BIRC3Q13489 604 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 PDE3AQ14432 1141 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 ZGPATQ8N5A5 531 aaKnown RBP14.23□□□□□ -0.13
CDH11-201ENST00000268603 STMN2Q93045 179 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 SETDB1Q15047 1291 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 TFCP2L1Q9NZI6 479 aa14.23□□□□□ -0.13
CDH11-201ENST00000268603 TLDC2A0PJX2 215 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 ZNF804AQ7Z570 1209 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 STX10O60499 249 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 FNBP1Q96RU3 617 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 TMOD4Q9NZQ9 345 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 CCT6AP40227 531 aaKnown RBP14.22□□□□□ -0.13
CDH11-201ENST00000268603 FAM200AQ8TCP9 573 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 CPSF2Q9P2I0 782 aaKnown RBP14.22□□□□□ -0.13
CDH11-201ENST00000268603 OPA1O60313 960 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 PPFIBP2Q8ND30 876 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 RAB3IPQ96QF0 476 aaPredicted RBP14.22□□□□□ -0.13
CDH11-201ENST00000268603 IVNS1ABPQ9Y6Y0 642 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 GJB2P29033 226 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 PICK1Q9NRD5 415 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 ATP6V1AP38606 617 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 IRAK4Q9NWZ3 460 aa14.22□□□□□ -0.13
CDH11-201ENST00000268603 IVLP07476 585 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 ATP6V1E1P36543 226 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 C4orf50Q6ZRC1 276 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 SEPT8Q92599 483 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 C8orf37Q96NL8 207 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 NUF2Q9BZD4 464 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 NEMFO60524 1076 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 MCM4P33991 863 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 ITIH3Q06033 890 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 CLUL1Q15846 466 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 WDR44Q5JSH3 913 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 CCDC170Q8IYT3 715 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 TNNI2P48788 182 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 DCAF17Q5H9S7 520 aaPredicted RBP14.21□□□□□ -0.13
CDH11-201ENST00000268603 CEP85LQ5SZL2 805 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
CDH11-201ENST00000268603 KCNA4P22459 653 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 AFAP1Q8N556 730 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 BANK1Q8NDB2 785 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 PSPC1Q8WXF1 523 aaKnown RBP14.21□□□□□ -0.14
CDH11-201ENST00000268603 M0QZ92 97 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 ABL1P00519 1130 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 MCM7P33993 719 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 ERCC6LQ2NKX8 1250 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 CCDC125Q86Z20 511 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 DDX27Q96GQ7 796 aaKnown RBP14.21□□□□□ -0.14
CDH11-201ENST00000268603 CAPZA3Q96KX2 299 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 POGZQ7Z3K3 1410 aa14.21□□□□□ -0.14
CDH11-201ENST00000268603 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 RSRC1Q96IZ7 334 aaKnown RBP14.2□□□□□ -0.14
CDH11-201ENST00000268603 NCOA2Q15596 1464 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 F6X3S4 739 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 NOP56O00567 594 aaKnown RBP14.2□□□□□ -0.14
CDH11-201ENST00000268603 STK10O94804 968 aaKnown RBP14.2□□□□□ -0.14
CDH11-201ENST00000268603 PRKG1Q13976 671 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 HS2ST1Q7LGA3 356 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 USP25Q9UHP3 1055 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 PRR16Q569H4 304 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 AFAP1L2Q8N4X5 818 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 THUMPD2Q9BTF0 503 aaKnown RBP14.2□□□□□ -0.14
CDH11-201ENST00000268603 RAPGEF1Q13905 1077 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 FMNL3Q8IVF7 1028 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 RRP36Q96EU6 259 aaKnown RBP14.2□□□□□ -0.14
CDH11-201ENST00000268603 CHMP6Q96FZ7 201 aa14.2□□□□□ -0.14
CDH11-201ENST00000268603 ESYT2A0FGR8 921 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 CSPG5O95196 566 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 CPLX4Q7Z7G2 160 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 GABPB2Q8TAK5 448 aaPredicted RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 IFT81Q8WYA0 676 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 TRPC3Q13507 836 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 LEO1Q8WVC0 666 aaPredicted RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDH11-201ENST00000268603 PPP1R12AO14974 1030 aaPredicted RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 SYKP43405 635 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 UBASH3AP57075 661 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 FAM160A1Q05DH4 1040 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 SDCCAG8Q86SQ7 713 aaPredicted RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 TEX13AQ9BXU3 409 aaPredicted RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 ZC3H12CQ9C0D7 883 aaKnown RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 RABGAP1Q9Y3P9 1069 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 CCDC169A6NNP5 214 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDH11-201ENST00000268603 PLCB4Q15147 1175 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 NAA16Q6N069 864 aaPredicted RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 JAKMIP2Q96AA8 810 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 KRT23Q9C075 422 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 VCX3BQ9H321 246 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 HAUS2Q9NVX0 235 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 FOXO3O43524 673 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms