RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ANO6Q4KMQ2 910 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 VPS36Q86VN1 386 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 PDCL2Q8N4E4 241 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 CDCA7Q9BWT1 371 aaPredicted RBP16.06■□□□□ 0.16
CDH3-201ENST00000264012 ITGA6P23229 1130 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 ENOX2Q16206 610 aaKnown RBP16.06■□□□□ 0.16
CDH3-201ENST00000264012 UBE2Q2Q8WVN8 375 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 SAMD9LQ8IVG5 1584 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 KDM6BO15054 1643 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 AOX1Q06278 1338 aa16.06■□□□□ 0.16
CDH3-201ENST00000264012 GCKRQ14397 625 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 TDRD12Q587J7 1177 aaKnown RBP16.05■□□□□ 0.16
CDH3-201ENST00000264012 HEATR3Q7Z4Q2 680 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 SPTLC2O15270 562 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 PICALMQ13492 652 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 ANKRD2Q9GZV1 360 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 LMTK3Q96Q04 1460 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 H0YHG0 523 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 ZC3H12CQ9C0D7 883 aaKnown RBP16.05■□□□□ 0.16
CDH3-201ENST00000264012 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDH3-201ENST00000264012 CASQ1P31415 396 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 AFMP43652 599 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 CENPHQ9H3R5 247 aa16.05■□□□□ 0.16
CDH3-201ENST00000264012 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
CDH3-201ENST00000264012 CCDC40Q4G0X9 1142 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 GNPATO15228 680 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 SYT1P21579 422 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 FAM193AP78312 1265 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 TRIM75PA6NK02 468 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 CALM1P0DP23 149 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 CALM2P0DP24 149 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 CALM3P0DP25 149 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 CCDC129Q6ZRS4 1044 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 MYO1BO43795 1136 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 MBD4O95243 580 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 PPP4R3AQ6IN85 833 aa16.04■□□□□ 0.16
CDH3-201ENST00000264012 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
CDH3-201ENST00000264012 SGSM2O43147 1006 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 TMCO3Q6UWJ1 677 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 USO1O60763 962 aaKnown RBP16.03■□□□□ 0.16
CDH3-201ENST00000264012 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 RTL9Q8NET4 1388 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 N4BP3O15049 544 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 SSR1P43307 286 aaKnown RBP16.03■□□□□ 0.16
CDH3-201ENST00000264012 TCERG1LQ5VWI1 586 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 TRMT1LQ7Z2T5 733 aaKnown RBP16.03■□□□□ 0.16
CDH3-201ENST00000264012 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 RMND1Q9NWS8 449 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 ABCC4O15439 1325 aa16.03■□□□□ 0.16
CDH3-201ENST00000264012 ERVK-7P63135 1459 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 TTLL12Q14166 644 aaPredicted RBP16.02■□□□□ 0.16
CDH3-201ENST00000264012 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 FAM114A1Q8IWE2 563 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 CCDC102AQ96A19 550 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 TRIM47Q96LD4 638 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 DNAJC25Q9H1X3 360 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 SLAIN2Q9P270 581 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 PLCG2P16885 1265 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 RXRAP19793 462 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 PAF1Q8N7H5 531 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 LRRC27Q9C0I9 530 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 METP08581 1390 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 PDE8AO60658 829 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.16
CDH3-201ENST00000264012 PRIM1P49642 420 aaKnown RBP16.02■□□□□ 0.16
CDH3-201ENST00000264012 NAPAP54920 295 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 XAGE2Q96GT9 111 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 GBP3Q9H0R5 595 aa16.02■□□□□ 0.16
CDH3-201ENST00000264012 STAT6P42226 847 aa16.02■□□□□ 0.15
CDH3-201ENST00000264012 EXOC1Q9NV70 894 aa16.02■□□□□ 0.15
CDH3-201ENST00000264012 JAG2Q9Y219 1238 aa16.02■□□□□ 0.15
CDH3-201ENST00000264012 SLC27A2O14975 620 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 RPS6KB1P23443 525 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 UBASH3AP57075 661 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
CDH3-201ENST00000264012 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 CCDC150Q8NCX0 1101 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 TSPYL1Q9H0U9 437 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 NEFHP12036 1026 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 OGFOD1Q8N543 542 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 CALML3P27482 149 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 SNX14Q9Y5W7 946 aa16.01■□□□□ 0.15
CDH3-201ENST00000264012 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
CDH3-201ENST00000264012 KCNQ3O43525 872 aa16■□□□□ 0.15
CDH3-201ENST00000264012 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
CDH3-201ENST00000264012 RTL1A6NKG5 1358 aa16■□□□□ 0.15
CDH3-201ENST00000264012 TRAPPC3LQ5T215 181 aa16■□□□□ 0.15
CDH3-201ENST00000264012 BRAPQ7Z569 592 aa16■□□□□ 0.15
CDH3-201ENST00000264012 DENND2AQ9ULE3 1009 aa16■□□□□ 0.15
CDH3-201ENST00000264012 SAMM50Q9Y512 469 aa16■□□□□ 0.15
CDH3-201ENST00000264012 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
CDH3-201ENST00000264012 TYRO3Q06418 890 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms