RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CDK11BP21127 795 aaKnown RBP18.55■□□□□ 0.56
LMNB1-201ENST00000261366 SFPQP23246 707 aaKnown RBP eCLIP18.55■□□□□ 0.561e-7■■■■■ 32.9
LMNB1-201ENST00000261366 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
LMNB1-201ENST00000261366 C1orf141Q5JVX7 400 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 IP6K1Q92551 441 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 NEUROD6Q96NK8 337 aa18.55■□□□□ 0.56
LMNB1-201ENST00000261366 CACNA1FO60840 1977 aa18.54■□□□□ 0.56
LMNB1-201ENST00000261366 CLCN6P51797 869 aa18.54■□□□□ 0.56
LMNB1-201ENST00000261366 ENGASEQ8NFI3 743 aa18.54■□□□□ 0.56
LMNB1-201ENST00000261366 NOL10Q9BSC4 688 aaKnown RBP18.54■□□□□ 0.56
LMNB1-201ENST00000261366 TMEM51Q9NW97 253 aa18.54■□□□□ 0.56
LMNB1-201ENST00000261366 ILDR1Q86SU0 546 aaPredicted RBP18.53■□□□□ 0.56
LMNB1-201ENST00000261366 NAT10Q9H0A0 1025 aaKnown RBP18.53■□□□□ 0.56
LMNB1-201ENST00000261366 LRRC37A3O60309 1634 aa18.53■□□□□ 0.56
LMNB1-201ENST00000261366 ZNF609O15014 1411 aa18.53■□□□□ 0.56
LMNB1-201ENST00000261366 CLIC4Q9Y696 253 aa18.53■□□□□ 0.56
LMNB1-201ENST00000261366 ATP5J2-PTCD1G3V325 749 aa18.52■□□□□ 0.56
LMNB1-201ENST00000261366 GOLIM4O00461 696 aa18.52■□□□□ 0.56
LMNB1-201ENST00000261366 PTCD1O75127 700 aaKnown RBP18.52■□□□□ 0.56
LMNB1-201ENST00000261366 SEC31AO94979 1220 aaKnown RBP18.52■□□□□ 0.56
LMNB1-201ENST00000261366 HOXB7P09629 217 aa18.52■□□□□ 0.56
LMNB1-201ENST00000261366 STK38Q15208 465 aa18.52■□□□□ 0.56
LMNB1-201ENST00000261366 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-201ENST00000261366 MRPS27Q92552 414 aaKnown RBP18.52■□□□□ 0.56
LMNB1-201ENST00000261366 ZNF396Q96N95 335 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-201ENST00000261366 NWD1Q149M9 1564 aa18.52■□□□□ 0.56
LMNB1-201ENST00000261366 ATP1A3P13637 1013 aa18.52■□□□□ 0.56
LMNB1-201ENST00000261366 MCMDC2Q4G0Z9 681 aa18.52■□□□□ 0.56
LMNB1-201ENST00000261366 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-201ENST00000261366 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.55
LMNB1-201ENST00000261366 CCDC66A2RUB6 948 aa18.52■□□□□ 0.55
LMNB1-201ENST00000261366 RNMTO43148 476 aaKnown RBP18.52■□□□□ 0.55
LMNB1-201ENST00000261366 DDX58O95786 925 aaKnown RBP18.52■□□□□ 0.55
LMNB1-201ENST00000261366 HAND2P61296 217 aa18.52■□□□□ 0.55
LMNB1-201ENST00000261366 TNNI3KQ59H18 835 aa18.52■□□□□ 0.55
LMNB1-201ENST00000261366 TTLL5Q6EMB2 1281 aa18.52■□□□□ 0.55
LMNB1-201ENST00000261366 UBE3BQ7Z3V4 1068 aa18.52■□□□□ 0.55
LMNB1-201ENST00000261366 FPGT-TNNI3KV9GXZ4 949 aa18.52■□□□□ 0.55
LMNB1-201ENST00000261366 PFKFB2O60825 505 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 URI1O94763 535 aaPredicted RBP18.51■□□□□ 0.55
LMNB1-201ENST00000261366 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 SMARCC2Q8TAQ2 1214 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 ALDH8A1Q9H2A2 487 aaPredicted RBP18.51■□□□□ 0.55
LMNB1-201ENST00000261366 ADGRL3Q9HAR2 1447 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 GCP02774 474 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 GSDMDP57764 484 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 IRX5P78411 483 aaPredicted RBP18.51■□□□□ 0.55
LMNB1-201ENST00000261366 USPL1Q5W0Q7 1092 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 DHX32Q7L7V1 743 aaKnown RBP18.51■□□□□ 0.55
LMNB1-201ENST00000261366 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 HDAC5Q9UQL6 1122 aa18.51■□□□□ 0.55
LMNB1-201ENST00000261366 NEXNQ0ZGT2 675 aa18.5■□□□□ 0.55
LMNB1-201ENST00000261366 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
LMNB1-201ENST00000261366 AKAP4Q5JQC9 854 aa18.5■□□□□ 0.55
LMNB1-201ENST00000261366 COPS6Q7L5N1 327 aa18.5■□□□□ 0.55
LMNB1-201ENST00000261366 SNRKQ9NRH2 765 aa18.5■□□□□ 0.55
LMNB1-201ENST00000261366 MARCKSP29966 332 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-201ENST00000261366 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-201ENST00000261366 FMR1NBQ8N0W7 255 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-201ENST00000261366 KCNH5Q8NCM2 988 aa18.5■□□□□ 0.55
LMNB1-201ENST00000261366 CHD2O14647 1828 aaKnown RBP18.5■□□□□ 0.55
LMNB1-201ENST00000261366 BMS1Q14692 1282 aaKnown RBP18.49■□□□□ 0.55
LMNB1-201ENST00000261366 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
LMNB1-201ENST00000261366 TIGD1Q96MW7 591 aa18.49■□□□□ 0.55
LMNB1-201ENST00000261366 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.49■□□□□ 0.558e-7■■■□□ 17.8
LMNB1-201ENST00000261366 FHOD1Q9Y613 1164 aa18.49■□□□□ 0.55
LMNB1-201ENST00000261366 MNS1Q8NEH6 495 aa18.49■□□□□ 0.55
LMNB1-201ENST00000261366 UBXN4Q92575 508 aa18.49■□□□□ 0.55
LMNB1-201ENST00000261366 ZCCHC17Q9NP64 241 aaKnown RBP18.49■□□□□ 0.55
LMNB1-201ENST00000261366 KIAA1468Q9P260 1216 aa18.49■□□□□ 0.55
LMNB1-201ENST00000261366 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
LMNB1-201ENST00000261366 NEK11Q8NG66 645 aa18.48■□□□□ 0.55
LMNB1-201ENST00000261366 NEURL1BA8MQ27 555 aa18.48■□□□□ 0.55
LMNB1-201ENST00000261366 SLC3A2P08195 630 aaKnown RBP18.48■□□□□ 0.55
LMNB1-201ENST00000261366 PNMA6AP0CW24 399 aaPredicted RBP18.48■□□□□ 0.55
LMNB1-201ENST00000261366 ATP5JP18859 108 aa18.48■□□□□ 0.55
LMNB1-201ENST00000261366 GNL2Q13823 731 aaKnown RBP18.48■□□□□ 0.55
LMNB1-201ENST00000261366 GCKRQ14397 625 aa18.48■□□□□ 0.55
LMNB1-201ENST00000261366 UTP14AQ9BVJ6 771 aaKnown RBP18.48■□□□□ 0.55
LMNB1-201ENST00000261366 TIMM10P62072 90 aa18.48■□□□□ 0.55
LMNB1-201ENST00000261366 CARD6Q9BX69 1037 aa18.48■□□□□ 0.55
LMNB1-201ENST00000261366 PDIA3P30101 505 aaKnown RBP18.47■□□□□ 0.55
LMNB1-201ENST00000261366 DPF2Q92785 391 aa18.47■□□□□ 0.55
LMNB1-201ENST00000261366 CCDC34Q96HJ3 373 aa18.47■□□□□ 0.55
LMNB1-201ENST00000261366 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
LMNB1-201ENST00000261366 H2AFXP16104 143 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-201ENST00000261366 STK11IPQ8N1F8 1099 aa18.47■□□□□ 0.55
LMNB1-201ENST00000261366 OSBPL5Q9H0X9 879 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-201ENST00000261366 E7EWF7 191 aa18.46■□□□□ 0.55
LMNB1-201ENST00000261366 SERPINC1P01008 464 aa18.46■□□□□ 0.55
LMNB1-201ENST00000261366 PLA2G4AP47712 749 aa18.46■□□□□ 0.55
LMNB1-201ENST00000261366 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
LMNB1-201ENST00000261366 DDX21Q9NR30 783 aaKnown RBP eCLIP18.46■□□□□ 0.55
LMNB1-201ENST00000261366 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
LMNB1-201ENST00000261366 FDPSP14324 419 aaKnown RBP18.46■□□□□ 0.55
LMNB1-201ENST00000261366 CFAP100Q494V2 611 aa18.46■□□□□ 0.55
LMNB1-201ENST00000261366 TMCO3Q6UWJ1 677 aa18.46■□□□□ 0.55
LMNB1-201ENST00000261366 CARMIL3Q8ND23 1372 aa18.46■□□□□ 0.55
LMNB1-201ENST00000261366 NRDCO43847 1150 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms