RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 XPO4Q9C0E2 1151 aaKnown RBP20.27■□□□□ 0.84
NDFIP1-201ENST00000253814 XBP1P17861 261 aa20.27■□□□□ 0.84
NDFIP1-201ENST00000253814 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
NDFIP1-201ENST00000253814 ERCC6LQ2NKX8 1250 aa20.27■□□□□ 0.84
NDFIP1-201ENST00000253814 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.84
NDFIP1-201ENST00000253814 CAGE1Q8TC20 777 aa20.27■□□□□ 0.84
NDFIP1-201ENST00000253814 RNF216Q9NWF9 866 aaPredicted RBP20.27■□□□□ 0.84
NDFIP1-201ENST00000253814 MINDY4BA8MYZ0 360 aa20.27■□□□□ 0.83
NDFIP1-201ENST00000253814 CYP21A2P08686 494 aa20.27■□□□□ 0.83
NDFIP1-201ENST00000253814 SCRN1Q12765 414 aa20.27■□□□□ 0.83
NDFIP1-201ENST00000253814 SPECC1Q5M775 1068 aa20.27■□□□□ 0.83
NDFIP1-201ENST00000253814 KRT28Q7Z3Y7 464 aa20.27■□□□□ 0.83
NDFIP1-201ENST00000253814 CCDC12Q8WUD4 166 aaPredicted RBP20.27■□□□□ 0.83
NDFIP1-201ENST00000253814 BABAM1Q9NWV8 329 aa20.27■□□□□ 0.83
NDFIP1-201ENST00000253814 HECW2Q9P2P5 1572 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 HOXB7P09629 217 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 KARSQ15046 597 aaKnown RBP20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 NAPBQ9H115 298 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 KCNF1Q9H3M0 494 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 USP6P35125 1406 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 SHPRHQ149N8 1683 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 LDHAL6AQ6ZMR3 332 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 ABCF2Q9UG63 623 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 DBNLQ9UJU6 430 aaKnown RBP20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
NDFIP1-201ENST00000253814 ERO1AQ96HE7 468 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 ZNF496Q96IT1 587 aaPredicted RBP20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 SLC12A7Q9Y666 1083 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 ALKQ9UM73 1620 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 DHX8Q14562 1220 aaKnown RBP20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 TMEM67Q5HYA8 995 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 LEKR1Q6ZMV7 388 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 FAM193AP78312 1265 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 AK7Q96M32 723 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 AKAP2Q9Y2D5 859 aa20.25■□□□□ 0.83
NDFIP1-201ENST00000253814 DMTNQ08495 405 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 SMARCE1Q969G3 411 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 CHGBP05060 677 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 UBAC1Q9BSL1 405 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 NEURL1BA8MQ27 555 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 ORAI2Q96SN7 254 aa20.24■□□□□ 0.83
NDFIP1-201ENST00000253814 INO80Q9ULG1 1556 aaPredicted RBP20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 RNF113AO15541 343 aaKnown RBP20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 KIF20AO95235 890 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 NAP1L1P55209 391 aaKnown RBP20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 MCM6Q14566 821 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 TDRD7Q8NHU6 1098 aaKnown RBP20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 PGBD1Q96JS3 809 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 TAF6LQ9Y6J9 622 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 AFMP43652 599 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 A0A1B0GUL7 405 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 ZNF202O95125 648 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 BRMS1Q9HCU9 246 aa20.23■□□□□ 0.83
NDFIP1-201ENST00000253814 STX17P56962 302 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 CCDC144BQ3MJ40 725 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 CARD6Q9BX69 1037 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 CWC15Q9P013 229 aaKnown RBP20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 E7EWF7 191 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 LMAN1P49257 510 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 SLC9C2Q5TAH2 1124 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 CALCOCO1Q9P1Z2 691 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 IL15P40933 162 aaPredicted RBP20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 NACAP1Q9BZK3 213 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 LZTFL1Q9NQ48 299 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 LRP2BPQ9P2M1 347 aa20.22■□□□□ 0.83
NDFIP1-201ENST00000253814 ATP5JP18859 108 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 FANCCQ00597 558 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 TAF3Q5VWG9 929 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 NOC3LQ8WTT2 800 aaKnown RBP20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 CPS1P31327 1500 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 ELP1O95163 1332 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 MARCH6O60337 910 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 NCBP1Q09161 790 aaKnown RBP20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 PHKBQ93100 1093 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 MYL10Q9BUA6 226 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 PCDHA7Q9UN72 937 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 CRB1P82279 1406 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 ADGRB2O60241 1585 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 SSRP1Q08945 709 aaKnown RBP20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 AXDND1Q5T1B0 1012 aaPredicted RBP20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 TIGD1Q96MW7 591 aa20.21■□□□□ 0.83
NDFIP1-201ENST00000253814 ZBTB43O43298 467 aa20.2■□□□□ 0.82
NDFIP1-201ENST00000253814 NDUFA8P51970 172 aa20.2■□□□□ 0.82
NDFIP1-201ENST00000253814 TOB2Q14106 344 aaPredicted RBP20.2■□□□□ 0.82
NDFIP1-201ENST00000253814 TBX22Q9Y458 520 aa20.2■□□□□ 0.82
NDFIP1-201ENST00000253814 NEO1Q92859 1461 aa20.2■□□□□ 0.82
NDFIP1-201ENST00000253814 KIF5CO60282 957 aa20.2■□□□□ 0.82
NDFIP1-201ENST00000253814 JAKMIP3Q5VZ66 844 aa20.2■□□□□ 0.82
NDFIP1-201ENST00000253814 GOLGA8FQ08AF8 430 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms