RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MYH6P13533 1939 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 CCAR1Q8IX12 1150 aaKnown RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 NFATC2IPQ8NCF5 419 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 RNF214Q8ND24 703 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 ZNF396Q96N95 335 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 DNAJC5Q9H3Z4 198 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 SPTLC3Q9NUV7 552 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 FBXO3Q9UK99 471 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 RBBP6Q7Z6E9 1792 aaKnown RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 H3BQV1 296 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 IFIT2P09913 472 aaKnown RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 XPCQ01831 940 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 IFFO2Q5TF58 517 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 CREB3L3Q68CJ9 461 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 CTDP1Q9Y5B0 961 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 FAM237AA0A1B0GTK4 181 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 TCRBV5S4A2TA0A5A2 114 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 ZSCAN22P10073 491 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 FGFR2P21802 821 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 GSDMDP57764 484 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 RBM10P98175 930 aaKnown RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 NMIQ13287 307 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 IFNL2Q8IZJ0 200 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 CWC15Q9P013 229 aaKnown RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 MORC2Q9Y6X9 1032 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 A0A0G2JLW4 131 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 NUTM2BA6NNL0 878 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 NUTM2EB1AL46 878 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 GABPB1Q06547 395 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 RESTQ13127 1097 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 NUTM2AQ8IVF1 878 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 ENGASEQ8NFI3 743 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 KCND1Q9NSA2 647 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 HOOK1Q9UJC3 728 aaKnown RBP4.88□□□□□ -1.63
UBE4A-201ENST00000252108 WDR19Q8NEZ3 1342 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 PCDH11XQ9BZA7 1347 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 PCDH11YQ9BZA8 1340 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 MYH1P12882 1939 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 F13A1P00488 732 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 PSME1Q06323 249 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 ZMYM1Q5SVZ6 1142 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 ATL3Q6DD88 541 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 XAGE3Q8WTP9 111 aa4.88□□□□□ -1.63
UBE4A-201ENST00000252108 CCDC88AQ3V6T2 1871 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 STX6O43752 255 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 CYP21A2P08686 494 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 SNRPA1P09661 255 aaKnown RBP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 RPS6KB1P23443 525 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 GTF2E1P29083 439 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 GTF2F1P35269 517 aaKnown RBP eCLIP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 SLC39A6Q13433 755 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 BICD2Q8TD16 824 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 TNMDQ9H2S6 317 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 RBM27Q9P2N5 1060 aaKnown RBP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 PSME4Q14997 1843 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 ADCY5O95622 1261 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 FDPSP14324 419 aaKnown RBP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 FAM200AQ8TCP9 573 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 TRIM5Q9C035 493 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 ACBD3Q9H3P7 528 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 HMG20BQ9P0W2 317 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 ATAD5Q96QE3 1844 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 SURF6O75683 361 aaKnown RBP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 EVA1CP58658 441 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 TPD52L1Q16890 204 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 LARP1Q6PKG0 1096 aaKnown RBP4.87□□□□□ -1.63
UBE4A-201ENST00000252108 USP48Q86UV5 1035 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 KLHDC4Q8TBB5 520 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 CALCOCO1Q9P1Z2 691 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 HPS5Q9UPZ3 1129 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 SMTNL1A8MU46 457 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 KDM4AO75164 1064 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 CPA1P15085 419 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 TUBB4BP68371 445 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 PDRG1Q9NUG6 133 aa4.87□□□□□ -1.63
UBE4A-201ENST00000252108 VPS37CA5D8V6 355 aaPredicted RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 SNW1Q13573 536 aaKnown RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 COPS6Q7L5N1 327 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 HSD3B7Q9H2F3 369 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 OGFRQ9NZT2 677 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 RIPOR2Q9Y4F9 1068 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 RBM8AQ9Y5S9 174 aaKnown RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 FOXD4L5Q5VV16 416 aaPredicted RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 TTC6Q86TZ1 520 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 CADPS2Q86UW7 1296 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 GOLGA6L1Q8N7Z2 621 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 FOXD4L4Q8WXT5 416 aaPredicted RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 GTF3C6Q969F1 213 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 UPF3BQ9BZI7 483 aaKnown RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 BCL11BQ9C0K0 894 aaPredicted RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 ZSCAN16Q9H4T2 348 aaPredicted RBP4.86□□□□□ -1.63
UBE4A-201ENST00000252108 CBFA2T2O43439 604 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 ANTXR2P58335 489 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 G3BP1Q13283 466 aaKnown RBP eCLIP4.86□□□□□ -1.637e-8■■■□□ 15.6
UBE4A-201ENST00000252108 SHISA4Q96DD7 197 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 PGBD1Q96JS3 809 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 DSCC1Q9BVC3 393 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 KCNF1Q9H3M0 494 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 RGL2O15211 777 aa4.86□□□□□ -1.63
UBE4A-201ENST00000252108 KINO60870 393 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms