RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.39
CCDC170-201ENST00000239374 N4BP3O15049 544 aa12.65□□□□□ -0.39
CCDC170-201ENST00000239374 AFMP43652 599 aa12.65□□□□□ -0.39
CCDC170-201ENST00000239374 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.39
CCDC170-201ENST00000239374 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.39
CCDC170-201ENST00000239374 VGLL3A8MV65 326 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 CTAGE15A4D2H0 777 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 CTAGE8P0CG41 777 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 RXRAP19793 462 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 CTAGE6Q86UF2 777 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 CTAGE4Q8IX94 777 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC170-201ENST00000239374 KIF1BO60333 1816 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 ZBTB43O43298 467 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 YEATS4O95619 227 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 NAA16Q6N069 864 aaPredicted RBP12.64□□□□□ -0.39
CCDC170-201ENST00000239374 KRBA2Q6ZNG9 492 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
CCDC170-201ENST00000239374 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
CCDC170-201ENST00000239374 ELP1O95163 1332 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 ZNF202O95125 648 aa12.64□□□□□ -0.39
CCDC170-201ENST00000239374 SNRPA1P09661 255 aaKnown RBP12.64□□□□□ -0.39
CCDC170-201ENST00000239374 EPS15P42566 896 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 TIMM10P62072 90 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 PPP2R3AQ06190 1150 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 RAD21O60216 631 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 RHOXF2BP0C7M4 288 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 RHOXF2Q9BQY4 288 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
CCDC170-201ENST00000239374 NAA30Q147X3 362 aaPredicted RBP12.63□□□□□ -0.39
CCDC170-201ENST00000239374 TNNI3KQ59H18 835 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 CTR9Q6PD62 1173 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC170-201ENST00000239374 ABCF2Q9UG63 623 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 FPGT-TNNI3KV9GXZ4 949 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 RNF113AO15541 343 aaKnown RBP12.63□□□□□ -0.39
CCDC170-201ENST00000239374 STX17P56962 302 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
CCDC170-201ENST00000239374 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 SPTLC3Q9NUV7 552 aa12.63□□□□□ -0.39
CCDC170-201ENST00000239374 KCNQ3O43525 872 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 USP8P40818 1118 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 BEND3Q5T5X7 828 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 ANO1Q5XXA6 986 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 C11orf57Q6ZUT1 292 aaPredicted RBP12.62□□□□□ -0.39
CCDC170-201ENST00000239374 IQSEC2Q5JU85 1478 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 GOLGA6L10A6NI86 522 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 MCM3P25205 808 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 ZNF569Q5MCW4 686 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 HOXB7P09629 217 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
CCDC170-201ENST00000239374 CEP112Q8N8E3 955 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 PI4K2BQ8TCG2 481 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 CDK5RAP3Q96JB5 506 aa12.62□□□□□ -0.39
CCDC170-201ENST00000239374 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
CCDC170-201ENST00000239374 IVLP07476 585 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 SPA17Q15506 151 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 STRN4Q9NRL3 753 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 CTAGE9A4FU28 777 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
CCDC170-201ENST00000239374 LDHAL6AQ6ZMR3 332 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 MED14O60244 1454 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 NLRP12P59046 1061 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 ARID5BQ14865 1188 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 TET3O43151 1660 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
CCDC170-201ENST00000239374 ETF1P62495 437 aaKnown RBP12.61□□□□□ -0.39
CCDC170-201ENST00000239374 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
CCDC170-201ENST00000239374 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC170-201ENST00000239374 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
CCDC170-201ENST00000239374 ARHGEF10O15013 1369 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 OAS2P29728 719 aaKnown RBP12.6□□□□□ -0.39
CCDC170-201ENST00000239374 DNA2P51530 1060 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 MAP3K12Q12852 859 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 RASSF4Q9H2L5 321 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 SHROOM2Q13796 1616 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 NFATC2IPQ8NCF5 419 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 DHX58Q96C10 678 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 JADE2Q9NQC1 790 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
CCDC170-201ENST00000239374 TNRQ92752 1358 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 ARHGAP6O43182 974 aa12.59□□□□□ -0.39
CCDC170-201ENST00000239374 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC170-201ENST00000239374 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms