RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PTF1AQ7RTS3 328 aa27.72■■■□□ 2.03
MSX2-201ENST00000239243 CDC5LQ99459 802 aaKnown RBP27.72■■■□□ 2.03
MSX2-201ENST00000239243 NARFQ9UHQ1 456 aa27.72■■■□□ 2.03
MSX2-201ENST00000239243 CCNL1Q9UK58 526 aaPredicted RBP27.72■■■□□ 2.03
MSX2-201ENST00000239243 TRPC5Q9UL62 973 aaPredicted RBP27.72■■■□□ 2.03
MSX2-201ENST00000239243 ATRNO75882 1429 aa27.71■■■□□ 2.03
MSX2-201ENST00000239243 ONECUT3O60422 494 aaPredicted RBP27.71■■■□□ 2.03
MSX2-201ENST00000239243 SEC31BQ9NQW1 1179 aa27.71■■■□□ 2.03
MSX2-201ENST00000239243 HSPA1LP34931 641 aa27.71■■■□□ 2.03
MSX2-201ENST00000239243 WASHC4Q2M389 1173 aa27.71■■■□□ 2.03
MSX2-201ENST00000239243 LARP6Q9BRS8 491 aaKnown RBP27.71■■■□□ 2.03
MSX2-201ENST00000239243 TAF6LQ9Y6J9 622 aa27.71■■■□□ 2.03
MSX2-201ENST00000239243 LARGE1O95461 756 aa27.7■■■□□ 2.02
MSX2-201ENST00000239243 OSBP2Q969R2 916 aa27.7■■■□□ 2.02
MSX2-201ENST00000239243 LY75O60449 1722 aa27.7■■■□□ 2.02
MSX2-201ENST00000239243 PDIA4P13667 645 aaKnown RBP27.69■■■□□ 2.02
MSX2-201ENST00000239243 ME3Q16798 604 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 CCDC83Q8IWF9 413 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 M0R2C6 588 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 KCNQ4P56696 695 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 KLHL40Q2TBA0 621 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 NYXQ9GZU5 481 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 GZF1Q9H116 711 aaPredicted RBP27.69■■■□□ 2.02
MSX2-201ENST00000239243 CTNNA3Q9UI47 895 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 TPCN1Q9ULQ1 816 aa27.69■■■□□ 2.02
MSX2-201ENST00000239243 SLFNL1Q499Z3 407 aa27.68■■■□□ 2.02
MSX2-201ENST00000239243 SF3B3Q15393 1217 aaKnown RBP27.68■■■□□ 2.02
MSX2-201ENST00000239243 RTCBQ9Y3I0 505 aaKnown RBP27.68■■■□□ 2.02
MSX2-201ENST00000239243 SBF2Q86WG5 1849 aa27.68■■■□□ 2.02
MSX2-201ENST00000239243 GNPATO15228 680 aa27.67■■■□□ 2.02
MSX2-201ENST00000239243 PHKA1P46020 1223 aa27.67■■■□□ 2.02
MSX2-201ENST00000239243 L1TD1Q5T7N2 865 aaKnown RBP27.67■■■□□ 2.02
MSX2-201ENST00000239243 PI16Q6UXB8 463 aa27.67■■■□□ 2.02
MSX2-201ENST00000239243 HELBQ8NG08 1087 aaPredicted RBP27.67■■■□□ 2.02
MSX2-201ENST00000239243 DDX49Q9Y6V7 483 aaKnown RBP27.67■■■□□ 2.02
MSX2-201ENST00000239243 ZPR1O75312 459 aa27.67■■■□□ 2.02
MSX2-201ENST00000239243 TOB2Q14106 344 aaPredicted RBP27.67■■■□□ 2.02
MSX2-201ENST00000239243 ERFEQ4G0M1 354 aa27.67■■■□□ 2.02
MSX2-201ENST00000239243 LMBRD1Q9NUN5 540 aa27.66■■■□□ 2.02
MSX2-201ENST00000239243 ISY1Q9ULR0 285 aaKnown RBP27.66■■■□□ 2.02
MSX2-201ENST00000239243 GTF2E1P29083 439 aaPredicted RBP27.65■■■□□ 2.02
MSX2-201ENST00000239243 SLC10A5Q5PT55 438 aa27.65■■■□□ 2.02
MSX2-201ENST00000239243 TAF1LQ8IZX4 1826 aa27.65■■■□□ 2.02
MSX2-201ENST00000239243 ADD2P35612 726 aa27.65■■■□□ 2.02
MSX2-201ENST00000239243 STX6O43752 255 aa27.64■■■□□ 2.02
MSX2-201ENST00000239243 UBE3CQ15386 1083 aa27.64■■■□□ 2.02
MSX2-201ENST00000239243 FAM182BQ5T319 152 aa27.64■■■□□ 2.02
MSX2-201ENST00000239243 TBC1D9BQ66K14 1250 aa27.64■■■□□ 2.02
MSX2-201ENST00000239243 BCL2L12Q9HB09 334 aa27.64■■■□□ 2.02
MSX2-201ENST00000239243 COL24A1Q17RW2 1714 aa27.64■■■□□ 2.02
MSX2-201ENST00000239243 GJB2P29033 226 aa27.64■■■□□ 2.01
MSX2-201ENST00000239243 FOXD4L5Q5VV16 416 aaPredicted RBP27.64■■■□□ 2.01
MSX2-201ENST00000239243 ANKRD18AQ8IVF6 992 aa27.64■■■□□ 2.01
MSX2-201ENST00000239243 FOXD4L4Q8WXT5 416 aaPredicted RBP27.64■■■□□ 2.01
MSX2-201ENST00000239243 SETDB2Q96T68 719 aa27.64■■■□□ 2.01
MSX2-201ENST00000239243 SYT1P21579 422 aa27.63■■■□□ 2.01
MSX2-201ENST00000239243 DHX32Q7L7V1 743 aaKnown RBP27.63■■■□□ 2.01
MSX2-201ENST00000239243 SEPT12Q8IYM1 358 aa27.63■■■□□ 2.01
MSX2-201ENST00000239243 TCEANC2Q96MN5 208 aa27.63■■■□□ 2.01
MSX2-201ENST00000239243 GOLGA6L3A6NEY3 463 aa27.63■■■□□ 2.01
MSX2-201ENST00000239243 SLC9C2Q5TAH2 1124 aa27.63■■■□□ 2.01
MSX2-201ENST00000239243 ZSCAN22P10073 491 aaPredicted RBP27.62■■■□□ 2.01
MSX2-201ENST00000239243 CHRNDQ07001 517 aa27.62■■■□□ 2.01
MSX2-201ENST00000239243 BICDL1Q6ZP65 573 aa27.62■■■□□ 2.01
MSX2-201ENST00000239243 SPATA5Q8NB90 893 aa27.62■■■□□ 2.01
MSX2-201ENST00000239243 ATP6V1DQ9Y5K8 247 aa27.62■■■□□ 2.01
MSX2-201ENST00000239243 COL9A3Q14050 684 aaPredicted RBP27.61■■■□□ 2.01
MSX2-201ENST00000239243 IMMTQ16891 758 aaKnown RBP27.61■■■□□ 2.01
MSX2-201ENST00000239243 PUS7LQ9H0K6 701 aaKnown RBP27.61■■■□□ 2.01
MSX2-201ENST00000239243 GPAA1O43292 621 aa27.61■■■□□ 2.01
MSX2-201ENST00000239243 ST3GAL1Q11201 340 aa27.61■■■□□ 2.01
MSX2-201ENST00000239243 Q6ZUG5 572 aa27.61■■■□□ 2.01
MSX2-201ENST00000239243 STOX1Q6ZVD7 989 aa27.61■■■□□ 2.01
MSX2-201ENST00000239243 LAMA4Q16363 1823 aa27.6■■■□□ 2.01
MSX2-201ENST00000239243 E7EWF7 191 aa27.6■■■□□ 2.01
MSX2-201ENST00000239243 PRPF40AO75400 957 aaKnown RBP27.6■■■□□ 2.01
MSX2-201ENST00000239243 IDH1O75874 414 aaKnown RBP27.6■■■□□ 2.01
MSX2-201ENST00000239243 NECAB1Q8N987 351 aa27.6■■■□□ 2.01
MSX2-201ENST00000239243 PIH1D3Q9NQM4 214 aaKnown RBP27.6■■■□□ 2.01
MSX2-201ENST00000239243 CASZ1Q86V15 1759 aa27.6■■■□□ 2.01
MSX2-201ENST00000239243 C4BP0C0L5 1744 aa27.6■■■□□ 2.01
MSX2-201ENST00000239243 PDCP20941 246 aa27.6■■■□□ 2.01
MSX2-201ENST00000239243 FGD1P98174 961 aa27.6■■■□□ 2.01
MSX2-201ENST00000239243 BCL11BQ9C0K0 894 aaPredicted RBP27.6■■■□□ 2.01
MSX2-201ENST00000239243 BSDC1Q9NW68 430 aaPredicted RBP27.6■■■□□ 2.01
MSX2-201ENST00000239243 FSD2A1L4K1 749 aa27.59■■■□□ 2.01
MSX2-201ENST00000239243 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
MSX2-201ENST00000239243 NBPF5PQ86XG9 351 aaPredicted RBP27.59■■■□□ 2.01
MSX2-201ENST00000239243 SRP68Q9UHB9 627 aaKnown RBP27.59■■■□□ 2.01
MSX2-201ENST00000239243 MAP3K12Q12852 859 aa27.58■■■□□ 2.01
MSX2-201ENST00000239243 RASGRF1Q13972 1273 aa27.58■■■□□ 2.01
MSX2-201ENST00000239243 TPTE2Q6XPS3 522 aa27.58■■■□□ 2.01
MSX2-201ENST00000239243 DOCK2Q92608 1830 aa27.58■■■□□ 2.01
MSX2-201ENST00000239243 ARHGEF1Q92888 912 aaKnown RBP27.57■■■□□ 2
MSX2-201ENST00000239243 NLRP3Q96P20 1036 aa27.57■■■□□ 2
MSX2-201ENST00000239243 PDE6AP16499 860 aa27.57■■■□□ 2
MSX2-201ENST00000239243 MBD3O95983 291 aa27.56■■■□□ 2
MSX2-201ENST00000239243 F13A1P00488 732 aa27.56■■■□□ 2
MSX2-201ENST00000239243 FGAP02671 866 aa27.56■■■□□ 2
MSX2-201ENST00000239243 EXOSC10Q01780 885 aaKnown RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms