RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 VIRMAQ69YN4 1812 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
TNFAIP3-201ENST00000237289 AMOTL1Q8IY63 956 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 GJA3Q9Y6H8 435 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 PDE1AP54750 535 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 JAG2Q9Y219 1238 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 SASH1O94885 1247 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 BCAMP50895 628 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
TNFAIP3-201ENST00000237289 TJP1Q07157 1748 aa13.46□□□□□ -0.26
TNFAIP3-201ENST00000237289 CRY2Q49AN0 593 aa13.46□□□□□ -0.26
TNFAIP3-201ENST00000237289 LDHCP07864 332 aa13.45□□□□□ -0.26
TNFAIP3-201ENST00000237289 MCCP23508 829 aa13.45□□□□□ -0.26
TNFAIP3-201ENST00000237289 RFX5P48382 616 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-201ENST00000237289 F8W031 263 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-201ENST00000237289 MYH14Q7Z406 1995 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-201ENST00000237289 CCDC102BQ68D86 513 aa13.45□□□□□ -0.26
TNFAIP3-201ENST00000237289 WDR66Q8TBY9 1149 aa13.45□□□□□ -0.26
TNFAIP3-201ENST00000237289 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 DPY19L2Q6NUT2 758 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 DBNDD1Q9H9R9 158 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 SNAP23O00161 211 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 GPR101Q96P66 508 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 TMOD2Q9NZR1 351 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 GTF2IP78347 998 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 ATG9AQ7Z3C6 839 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 TBC1D16Q8TBP0 767 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 EVI5LQ96CN4 794 aa13.44□□□□□ -0.26
TNFAIP3-201ENST00000237289 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 TBC1D22AQ8WUA7 517 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 COA1Q9GZY4 146 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 CDC45O75419 566 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 LDHBP07195 334 aaKnown RBP13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 ADORA1P30542 326 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 GSTO1P78417 241 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 TRIM34Q9BYJ4 488 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 PAG1Q9NWQ8 432 aa13.43□□□□□ -0.26
TNFAIP3-201ENST00000237289 PHKA1P46020 1223 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 AOC3Q16853 763 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 SPATA5Q8NB90 893 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 NLGN2Q8NFZ4 835 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 TNIP1Q15025 636 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 LY75O60449 1722 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
TNFAIP3-201ENST00000237289 PLEKHM2Q8IWE5 1019 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 BAG3O95817 575 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 MFSD14BQ5SR56 506 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 NAA16Q6N069 864 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 SEMA3EO15041 775 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 MYO1BO43795 1136 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 PODNQ7Z5L7 613 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 TOMM22Q9NS69 142 aa13.41□□□□□ -0.26
TNFAIP3-201ENST00000237289 REC8O95072 547 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 ATP5JP18859 108 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 FGD1P98174 961 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 SKAP1Q86WV1 359 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 RAD17O75943 681 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 CD209Q9NNX6 404 aa13.4□□□□□ -0.26
TNFAIP3-201ENST00000237289 CYP7A1P22680 504 aa13.4□□□□□ -0.27
TNFAIP3-201ENST00000237289 PTGER2P43116 358 aa13.4□□□□□ -0.27
TNFAIP3-201ENST00000237289 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.27
TNFAIP3-201ENST00000237289 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 ZAP70P43403 619 aa13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 MAST3O60307 1309 aa13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 ECE2O60344 883 aa13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 KDM2BQ8NHM5 1336 aa13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 KLRG2A4D1S0 409 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-201ENST00000237289 USP17L3A6NCW0 530 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 USP17L4A6NCW7 530 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 USP17L1Q7RTZ2 530 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 FAM84BQ96KN1 310 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 POLLQ9UGP5 575 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 TNS1Q9HBL0 1735 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 H7C1D1 291 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 USP5P45974 858 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 LMNB1P20700 586 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 AOX1Q06278 1338 aa13.38□□□□□ -0.27
TNFAIP3-201ENST00000237289 BMP2KLQ5H9B9 411 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 ZNRF3Q9ULT6 936 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms