RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SPTLC3Q9NUV7 552 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 POLR3GO15318 223 aaPredicted RBP11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 TNNT1P13805 278 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 PTGS1P23219 599 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 TFCP2Q12800 502 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 RNF20Q5VTR2 975 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 LEO1Q8WVC0 666 aaPredicted RBP11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
HLA-DOA-201ENST00000229829 TOM1O60784 492 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 NR1I2O75469 434 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 ANO6Q4KMQ2 910 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 FAM200AQ8TCP9 573 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 NRBP1Q9UHY1 535 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 PTCD1O75127 700 aaKnown RBP11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 FOSBP53539 338 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 HDAC5Q9UQL6 1122 aa11.06□□□□□ -0.64
HLA-DOA-201ENST00000229829 GOLGA6L4A6NEF3 574 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 GOLGA6L6A8MZA4 724 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 CEBPZQ03701 1054 aaKnown RBP11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 PTPN12Q05209 780 aaKnown RBP11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 LRMPQ12912 555 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 GTF3C6Q969F1 213 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 ZNF496Q96IT1 587 aaPredicted RBP11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 CBX8Q9HC52 389 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 PDCP20941 246 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 Q6ZUG5 572 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 DDX46Q7L014 1031 aaKnown RBP11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 DBNDD2Q9BQY9 259 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 ELP1O95163 1332 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 CYP21A2P08686 494 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 NCBP1Q09161 790 aaKnown RBP11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 NEXNQ0ZGT2 675 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 ANKRD1Q15327 319 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 BRF1Q92994 677 aa11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 ZNF646O15015 1829 aaPredicted RBP11.05□□□□□ -0.64
HLA-DOA-201ENST00000229829 RFX5P48382 616 aaPredicted RBP11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 TNNI3KQ59H18 835 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 KRT222Q8N1A0 295 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 NEK1Q96PY6 1258 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 FEZ1Q99689 392 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 METTL22Q9BUU2 404 aaPredicted RBP11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 FPGT-TNNI3KV9GXZ4 949 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 COL5A2P05997 1499 aaPredicted RBP11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 A0A0G2JLW4 131 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 CCDC186Q7Z3E2 898 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 FTOQ9C0B1 505 aaKnown RBP eCLIP11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 SCAND2PQ9GZW5 306 aaPredicted RBP11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 ZNF609O15014 1411 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 USPL1Q5W0Q7 1092 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 BICD2Q8TD16 824 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 DNAJC25Q9H1X3 360 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 TRMT1Q9NXH9 659 aaKnown RBP11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
HLA-DOA-201ENST00000229829 A0A087WWV3 80 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 HSP90B1P14625 803 aaKnown RBP11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 TSGA10IPQ3SY00 556 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 TRIM5Q9C035 493 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 NPHP3Q7Z494 1330 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 ATP5JP18859 108 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 ALDH8A1Q9H2A2 487 aaPredicted RBP11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 COPRSQ9NQ92 184 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 HMG20BQ9P0W2 317 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 APPP05067 770 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 HSPA2P54652 639 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 SCRN1Q12765 414 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 RESTQ13127 1097 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
HLA-DOA-201ENST00000229829 KDM6AO15550 1401 aaPredicted RBP11.02□□□□□ -0.64
HLA-DOA-201ENST00000229829 ERBB3P21860 1342 aa11.02□□□□□ -0.64
HLA-DOA-201ENST00000229829 CLSTN2Q9H4D0 955 aa11.02□□□□□ -0.65
HLA-DOA-201ENST00000229829 SLFN14P0C7P3 912 aa11.02□□□□□ -0.65
HLA-DOA-201ENST00000229829 GABPB1Q06547 395 aaPredicted RBP11.02□□□□□ -0.65
HLA-DOA-201ENST00000229829 C10orf67Q8IYJ2 551 aa11.02□□□□□ -0.65
HLA-DOA-201ENST00000229829 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.65
HLA-DOA-201ENST00000229829 H3BQV1 296 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 TERF2Q15554 542 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 IFFO2Q5TF58 517 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 RAPGEF4Q8WZA2 1011 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 A0A087WZG4 1122 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 ZNF165P49910 485 aa11.01□□□□□ -0.65
HLA-DOA-201ENST00000229829 RBM43Q6ZSC3 357 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms