RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PLA2G4DQ86XP0 818 aa19.14■□□□□ 0.65
LTBR-201ENST00000228918 ZNF594Q96JF6 807 aaPredicted RBP19.14■□□□□ 0.65
LTBR-201ENST00000228918 KIF3AQ9Y496 699 aa19.14■□□□□ 0.65
LTBR-201ENST00000228918 A0A1B0GUL7 405 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 RNF113AO15541 343 aaKnown RBP19.13■□□□□ 0.65
LTBR-201ENST00000228918 PTGS1P23219 599 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 DNAJC25Q9H1X3 360 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 ZBTB3Q9H5J0 574 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 A1BGP04217 495 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 ZNF165P49910 485 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 ZNF75DP51815 510 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.13■□□□□ 0.65
LTBR-201ENST00000228918 RCOR1Q9UKL0 485 aa19.13■□□□□ 0.65
LTBR-201ENST00000228918 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
LTBR-201ENST00000228918 CAVIN2O95810 425 aa19.12■□□□□ 0.65
LTBR-201ENST00000228918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.12■□□□□ 0.65
LTBR-201ENST00000228918 NWD2Q9ULI1 1742 aa19.12■□□□□ 0.65
LTBR-201ENST00000228918 M0R2C6 588 aa19.12■□□□□ 0.65
LTBR-201ENST00000228918 FOSBP53539 338 aa19.12■□□□□ 0.65
LTBR-201ENST00000228918 CCT2P78371 535 aaKnown RBP19.12■□□□□ 0.65
LTBR-201ENST00000228918 CEBPZQ03701 1054 aaKnown RBP19.12■□□□□ 0.65
LTBR-201ENST00000228918 ZCRB1Q8TBF4 217 aaKnown RBP19.12■□□□□ 0.65
LTBR-201ENST00000228918 CADPS2Q86UW7 1296 aa19.11■□□□□ 0.65
LTBR-201ENST00000228918 SMAP1Q8IYB5 467 aaPredicted RBP19.11■□□□□ 0.65
LTBR-201ENST00000228918 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
LTBR-201ENST00000228918 FTOQ9C0B1 505 aaKnown RBP eCLIP19.11■□□□□ 0.65
LTBR-201ENST00000228918 SHANK3Q9BYB0 1731 aa19.11■□□□□ 0.65
LTBR-201ENST00000228918 WDR17Q8IZU2 1322 aa19.11■□□□□ 0.65
LTBR-201ENST00000228918 PDIA3P30101 505 aaKnown RBP19.11■□□□□ 0.65
LTBR-201ENST00000228918 USP28Q96RU2 1077 aa19.11■□□□□ 0.65
LTBR-201ENST00000228918 PUS3Q9BZE2 481 aaKnown RBP19.11■□□□□ 0.65
LTBR-201ENST00000228918 TRIM5Q9C035 493 aa19.11■□□□□ 0.65
LTBR-201ENST00000228918 NCOA5Q9HCD5 579 aaKnown RBP19.11■□□□□ 0.65
LTBR-201ENST00000228918 TNS2Q63HR2 1409 aa19.11■□□□□ 0.65
LTBR-201ENST00000228918 ATL3Q6DD88 541 aa19.1■□□□□ 0.65
LTBR-201ENST00000228918 CCDC186Q7Z3E2 898 aa19.1■□□□□ 0.65
LTBR-201ENST00000228918 CTAGE5O15320 804 aa19.09■□□□□ 0.65
LTBR-201ENST00000228918 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
LTBR-201ENST00000228918 FBXL16Q8N461 479 aa19.09■□□□□ 0.65
LTBR-201ENST00000228918 GOLPH3LQ9H4A5 285 aa19.09■□□□□ 0.65
LTBR-201ENST00000228918 CARMIL3Q8ND23 1372 aa19.09■□□□□ 0.65
LTBR-201ENST00000228918 OSBP2Q969R2 916 aa19.09■□□□□ 0.65
LTBR-201ENST00000228918 ZNF396Q96N95 335 aaPredicted RBP19.09■□□□□ 0.65
LTBR-201ENST00000228918 DDX60Q8IY21 1712 aaKnown RBP19.08■□□□□ 0.65
LTBR-201ENST00000228918 IQCB1Q15051 598 aa19.08■□□□□ 0.65
LTBR-201ENST00000228918 NKX1-1Q15270 411 aaPredicted RBP19.08■□□□□ 0.65
LTBR-201ENST00000228918 TTLL5Q6EMB2 1281 aa19.08■□□□□ 0.65
LTBR-201ENST00000228918 CHST3Q7LGC8 479 aa19.08■□□□□ 0.65
LTBR-201ENST00000228918 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.65
LTBR-201ENST00000228918 ISCA1Q9BUE6 129 aa19.08■□□□□ 0.65
LTBR-201ENST00000228918 EVCP57679 992 aa19.08■□□□□ 0.64
LTBR-201ENST00000228918 DRC7Q8IY82 874 aa19.08■□□□□ 0.64
LTBR-201ENST00000228918 CEP126Q9P2H0 1117 aa19.08■□□□□ 0.64
LTBR-201ENST00000228918 NRBP1Q9UHY1 535 aa19.08■□□□□ 0.64
LTBR-201ENST00000228918 NAP1L2Q9ULW6 460 aaPredicted RBP19.08■□□□□ 0.64
LTBR-201ENST00000228918 MYH7P12883 1935 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 CDC25BP30305 580 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 SNW1Q13573 536 aaKnown RBP19.07■□□□□ 0.64
LTBR-201ENST00000228918 STX1AQ16623 288 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 CCDC73Q6ZRK6 1079 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 C11orf57Q6ZUT1 292 aaPredicted RBP19.07■□□□□ 0.64
LTBR-201ENST00000228918 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 TSC1Q92574 1164 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 CHMP4CQ96CF2 233 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 COL5A2P05997 1499 aaPredicted RBP19.07■□□□□ 0.64
LTBR-201ENST00000228918 FOXP2O15409 715 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 LRMPQ12912 555 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 ZNF710Q8N1W2 664 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 ENGASEQ8NFI3 743 aa19.07■□□□□ 0.64
LTBR-201ENST00000228918 FKBP4Q02790 459 aaKnown RBP eCLIP19.06■□□□□ 0.64
LTBR-201ENST00000228918 LRRFIP1Q32MZ4 808 aaKnown RBP19.06■□□□□ 0.64
LTBR-201ENST00000228918 ZSCAN25Q6NSZ9 544 aa19.06■□□□□ 0.64
LTBR-201ENST00000228918 SARM1Q6SZW1 724 aa19.06■□□□□ 0.64
LTBR-201ENST00000228918 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
LTBR-201ENST00000228918 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 FDPSP14324 419 aaKnown RBP19.05■□□□□ 0.64
LTBR-201ENST00000228918 ADORA1P30542 326 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 GUCY1B3Q02153 619 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 FAM160A1Q05DH4 1040 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 CHAF1AQ13111 956 aaPredicted RBP19.05■□□□□ 0.64
LTBR-201ENST00000228918 CCDC57Q2TAC2 916 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 CCDC158Q5M9N0 1113 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 TTC39AQ5SRH9 613 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 PRDM11Q9NQV5 511 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 TOGARAM1Q9Y4F4 1720 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 PPFIA3O75145 1194 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 CLIP2Q9UDT6 1046 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 CTNNA3Q9UI47 895 aa19.05■□□□□ 0.64
LTBR-201ENST00000228918 KINO60870 393 aaKnown RBP19.04■□□□□ 0.64
LTBR-201ENST00000228918 ZFYP08048 801 aaPredicted RBP19.04■□□□□ 0.64
LTBR-201ENST00000228918 XAGE2Q96GT9 111 aa19.04■□□□□ 0.64
LTBR-201ENST00000228918 AKAP2Q9Y2D5 859 aa19.04■□□□□ 0.64
LTBR-201ENST00000228918 GOLGA6L19H0YKK7 550 aa19.04■□□□□ 0.64
LTBR-201ENST00000228918 TCIRG1Q13488 830 aa19.04■□□□□ 0.64
LTBR-201ENST00000228918 FSIP1Q8NA03 581 aa19.04■□□□□ 0.64
LTBR-201ENST00000228918 GPHNQ9NQX3 736 aaPredicted RBP19.04■□□□□ 0.64
LTBR-201ENST00000228918 PODXL2Q9NZ53 605 aa19.04■□□□□ 0.64
LTBR-201ENST00000228918 RIOK3O14730 519 aaKnown RBP19.03■□□□□ 0.64
LTBR-201ENST00000228918 ME1P48163 572 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms