RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 CCDC102BQ68D86 513 aa18.28■□□□□ 0.52
PAF1-201ENST00000221265 NRXN2Q9P2S2 1712 aa18.28■□□□□ 0.52
PAF1-201ENST00000221265 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
PAF1-201ENST00000221265 IL27Q8NEV9 243 aa18.27■□□□□ 0.52
PAF1-201ENST00000221265 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.27■□□□□ 0.52
PAF1-201ENST00000221265 MMP10P09238 476 aa18.27■□□□□ 0.51
PAF1-201ENST00000221265 SLC5A1P13866 664 aa18.27■□□□□ 0.51
PAF1-201ENST00000221265 ZAP70P43403 619 aa18.27■□□□□ 0.51
PAF1-201ENST00000221265 SF3B2Q13435 895 aaKnown RBP18.27■□□□□ 0.51
PAF1-201ENST00000221265 KBTBD3Q8NAB2 608 aa18.27■□□□□ 0.51
PAF1-201ENST00000221265 CIZ1Q9ULV3 898 aaPredicted RBP18.27■□□□□ 0.51
PAF1-201ENST00000221265 BAG6P46379 1132 aa18.26■□□□□ 0.51
PAF1-201ENST00000221265 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
PAF1-201ENST00000221265 PDGFDQ9GZP0 370 aaPredicted RBP18.26■□□□□ 0.51
PAF1-201ENST00000221265 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
PAF1-201ENST00000221265 MYH7P12883 1935 aa18.26■□□□□ 0.51
PAF1-201ENST00000221265 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
PAF1-201ENST00000221265 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
PAF1-201ENST00000221265 BCAMP50895 628 aa18.25■□□□□ 0.51
PAF1-201ENST00000221265 RABEP1Q15276 862 aa18.25■□□□□ 0.51
PAF1-201ENST00000221265 SEC62Q99442 399 aaKnown RBP18.25■□□□□ 0.51
PAF1-201ENST00000221265 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
PAF1-201ENST00000221265 QSER1Q2KHR3 1735 aa18.25■□□□□ 0.51
PAF1-201ENST00000221265 HIP1O00291 1037 aa18.24■□□□□ 0.51
PAF1-201ENST00000221265 PTH1RQ03431 593 aa18.24■□□□□ 0.51
PAF1-201ENST00000221265 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
PAF1-201ENST00000221265 RUFY2Q8WXA3 655 aa18.24■□□□□ 0.51
PAF1-201ENST00000221265 ARID4AP29374 1257 aaPredicted RBP18.24■□□□□ 0.51
PAF1-201ENST00000221265 GRAPQ13588 217 aa18.24■□□□□ 0.51
PAF1-201ENST00000221265 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
PAF1-201ENST00000221265 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
PAF1-201ENST00000221265 ZNF512BQ96KM6 892 aaPredicted RBP18.24■□□□□ 0.51
PAF1-201ENST00000221265 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
PAF1-201ENST00000221265 KLRK1P26718 216 aa18.23■□□□□ 0.51
PAF1-201ENST00000221265 RAD50Q92878 1312 aa18.23■□□□□ 0.51
PAF1-201ENST00000221265 RAB3GAP1Q15042 981 aa18.22■□□□□ 0.51
PAF1-201ENST00000221265 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
PAF1-201ENST00000221265 RFX7Q2KHR2 1363 aa18.22■□□□□ 0.51
PAF1-201ENST00000221265 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
PAF1-201ENST00000221265 CYP2E1P05181 493 aaPredicted RBP18.22■□□□□ 0.51
PAF1-201ENST00000221265 GYG1P46976 350 aa18.22■□□□□ 0.51
PAF1-201ENST00000221265 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
PAF1-201ENST00000221265 CCDC129Q6ZRS4 1044 aa18.22■□□□□ 0.51
PAF1-201ENST00000221265 HMG20BQ9P0W2 317 aa18.22■□□□□ 0.51
PAF1-201ENST00000221265 KLRG2A4D1S0 409 aaPredicted RBP18.21■□□□□ 0.51
PAF1-201ENST00000221265 HSP90AA1P07900 732 aaKnown RBP18.21■□□□□ 0.51
PAF1-201ENST00000221265 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
PAF1-201ENST00000221265 KIAA1211Q6ZU35 1233 aa18.21■□□□□ 0.51
PAF1-201ENST00000221265 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
PAF1-201ENST00000221265 PARP3Q9Y6F1 533 aa18.21■□□□□ 0.51
PAF1-201ENST00000221265 COL11A2P13942 1736 aaPredicted RBP18.21■□□□□ 0.51
PAF1-201ENST00000221265 TRAK2O60296 914 aa18.21■□□□□ 0.51
PAF1-201ENST00000221265 PIH1D3Q9NQM4 214 aaKnown RBP18.21■□□□□ 0.51
PAF1-201ENST00000221265 UQCRFS1P1P0C7P4 283 aa18.2■□□□□ 0.5
PAF1-201ENST00000221265 CCDC171Q6TFL3 1326 aa18.2■□□□□ 0.5
PAF1-201ENST00000221265 DDX11L8A8MPP1 907 aa18.19■□□□□ 0.5
PAF1-201ENST00000221265 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
PAF1-201ENST00000221265 RBM17Q96I25 401 aaKnown RBP18.19■□□□□ 0.5
PAF1-201ENST00000221265 BRIP1Q9BX63 1249 aa18.19■□□□□ 0.5
PAF1-201ENST00000221265 CACNA1SQ13698 1873 aa18.19■□□□□ 0.5
PAF1-201ENST00000221265 RNF113AO15541 343 aaKnown RBP18.19■□□□□ 0.5
PAF1-201ENST00000221265 HOXA10P31260 410 aaPredicted RBP18.19■□□□□ 0.5
PAF1-201ENST00000221265 HSPA4P34932 840 aa18.19■□□□□ 0.5
PAF1-201ENST00000221265 ANKRD2Q9GZV1 360 aa18.19■□□□□ 0.5
PAF1-201ENST00000221265 DOCK2Q92608 1830 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 MYH13Q9UKX3 1938 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 KCNJ4P48050 445 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 ZMYM1Q5SVZ6 1142 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 TXNRD3Q86VQ6 643 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 FAM84BQ96KN1 310 aaPredicted RBP18.18■□□□□ 0.5
PAF1-201ENST00000221265 ZNF804BA4D1E1 1349 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 COL1A1P02452 1464 aaPredicted RBP18.18■□□□□ 0.5
PAF1-201ENST00000221265 MCMDC2Q4G0Z9 681 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 RASEFQ8IZ41 740 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
PAF1-201ENST00000221265 MCCP23508 829 aa18.17■□□□□ 0.5
PAF1-201ENST00000221265 OSBP2Q969R2 916 aa18.17■□□□□ 0.5
PAF1-201ENST00000221265 MAST3O60307 1309 aa18.16■□□□□ 0.5
PAF1-201ENST00000221265 M0R2C6 588 aa18.16■□□□□ 0.5
PAF1-201ENST00000221265 EPB41L2O43491 1005 aaKnown RBP18.16■□□□□ 0.5
PAF1-201ENST00000221265 SRGNP10124 158 aa18.16■□□□□ 0.5
PAF1-201ENST00000221265 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
PAF1-201ENST00000221265 GPR101Q96P66 508 aaPredicted RBP18.16■□□□□ 0.5
PAF1-201ENST00000221265 GZF1Q9H116 711 aaPredicted RBP18.16■□□□□ 0.5
PAF1-201ENST00000221265 RBM8AQ9Y5S9 174 aaKnown RBP18.16■□□□□ 0.5
PAF1-201ENST00000221265 IRS2Q9Y4H2 1338 aa18.16■□□□□ 0.5
PAF1-201ENST00000221265 IDH1O75874 414 aaKnown RBP18.16■□□□□ 0.5
PAF1-201ENST00000221265 GPSM2P81274 684 aa18.16■□□□□ 0.5
PAF1-201ENST00000221265 CRAMP1Q96RY5 1269 aa18.16■□□□□ 0.5
PAF1-201ENST00000221265 VPS53Q5VIR6 699 aa18.15■□□□□ 0.5
PAF1-201ENST00000221265 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
PAF1-201ENST00000221265 FBXO33Q7Z6M2 555 aa18.15■□□□□ 0.5
PAF1-201ENST00000221265 GBP4Q96PP9 640 aa18.15■□□□□ 0.5
PAF1-201ENST00000221265 HELLSQ9NRZ9 838 aa18.15■□□□□ 0.5
PAF1-201ENST00000221265 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
PAF1-201ENST00000221265 SNX14Q9Y5W7 946 aa18.15■□□□□ 0.5
PAF1-201ENST00000221265 CAVIN4Q5BKX8 364 aa18.14■□□□□ 0.5
PAF1-201ENST00000221265 VPS37DQ86XT2 251 aa18.14■□□□□ 0.5
PAF1-201ENST00000221265 LRRC37AA6NMS7 1700 aa18.14■□□□□ 0.5
PAF1-201ENST00000221265 XDHP47989 1333 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms