RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 ARAP2Q8WZ64 1704 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 CHGBP05060 677 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 CPA1P15085 419 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 ARID4AP29374 1257 aaPredicted RBP20.78■□□□□ 0.92
VRK1-201ENST00000216639 MCAMP43121 646 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 CCDC102BQ68D86 513 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 ALDH8A1Q9H2A2 487 aaPredicted RBP20.78■□□□□ 0.92
VRK1-201ENST00000216639 BCL2L12Q9HB09 334 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 MAST3O60307 1309 aa20.78■□□□□ 0.92
VRK1-201ENST00000216639 WASHC4Q2M389 1173 aa20.77■□□□□ 0.92
VRK1-201ENST00000216639 HELBQ8NG08 1087 aaPredicted RBP20.77■□□□□ 0.92
VRK1-201ENST00000216639 TAF1LQ8IZX4 1826 aa20.77■□□□□ 0.92
VRK1-201ENST00000216639 RPS6KB1P23443 525 aa20.76■□□□□ 0.91
VRK1-201ENST00000216639 ANKRD18AQ8IVF6 992 aa20.76■□□□□ 0.91
VRK1-201ENST00000216639 APPBP2Q92624 585 aa20.76■□□□□ 0.91
VRK1-201ENST00000216639 RFC4P35249 363 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 TPTE2Q6XPS3 522 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 FAM196AQ6ZSG2 479 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
VRK1-201ENST00000216639 ARHGEF1Q92888 912 aaKnown RBP20.75■□□□□ 0.91
VRK1-201ENST00000216639 NEK1Q96PY6 1258 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 SRP68Q9UHB9 627 aaKnown RBP20.75■□□□□ 0.91
VRK1-201ENST00000216639 C4BP0C0L5 1744 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 TRAK2O60296 914 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 BAG4O95429 457 aaKnown RBP20.75■□□□□ 0.91
VRK1-201ENST00000216639 HMGB1P09429 215 aaKnown RBP20.75■□□□□ 0.91
VRK1-201ENST00000216639 HSPD1P10809 573 aaKnown RBP20.75■□□□□ 0.91
VRK1-201ENST00000216639 PHKA1P46020 1223 aa20.75■□□□□ 0.91
VRK1-201ENST00000216639 SKOR2Q2VWA4 1001 aaPredicted RBP20.75■□□□□ 0.91
VRK1-201ENST00000216639 HMGB2P26583 209 aaKnown RBP20.74■□□□□ 0.91
VRK1-201ENST00000216639 CHRNDQ07001 517 aa20.74■□□□□ 0.91
VRK1-201ENST00000216639 NLRP3Q96P20 1036 aa20.74■□□□□ 0.91
VRK1-201ENST00000216639 CTNNA3Q9UI47 895 aa20.74■□□□□ 0.91
VRK1-201ENST00000216639 M0R2C6 588 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 CYP21A2P08686 494 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 ADRA2BP18089 450 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 PKP1Q13835 747 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 SLFNL1Q499Z3 407 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 PI16Q6UXB8 463 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 OSBP2Q969R2 916 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 KRT27Q7Z3Y8 459 aa20.73■□□□□ 0.91
VRK1-201ENST00000216639 AKAP11Q9UKA4 1901 aa20.72■□□□□ 0.91
VRK1-201ENST00000216639 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
VRK1-201ENST00000216639 SPATA5Q8NB90 893 aa20.72■□□□□ 0.91
VRK1-201ENST00000216639 BSDC1Q9NW68 430 aaPredicted RBP20.72■□□□□ 0.91
VRK1-201ENST00000216639 SMC3Q9UQE7 1217 aa20.72■□□□□ 0.91
VRK1-201ENST00000216639 MYH7P12883 1935 aa20.71■□□□□ 0.91
VRK1-201ENST00000216639 BRD1O95696 1058 aa20.71■□□□□ 0.91
VRK1-201ENST00000216639 ADD2P35612 726 aa20.71■□□□□ 0.91
VRK1-201ENST00000216639 UBE3CQ15386 1083 aa20.71■□□□□ 0.91
VRK1-201ENST00000216639 SLC27A3Q5K4L6 730 aa20.71■□□□□ 0.91
VRK1-201ENST00000216639 LARP6Q9BRS8 491 aaKnown RBP20.71■□□□□ 0.91
VRK1-201ENST00000216639 ZDHHC9Q9Y397 364 aa20.71■□□□□ 0.91
VRK1-201ENST00000216639 WDR33Q9C0J8 1336 aaKnown RBP20.7■□□□□ 0.9
VRK1-201ENST00000216639 IDH1O75874 414 aaKnown RBP20.7■□□□□ 0.9
VRK1-201ENST00000216639 SLC9C2Q5TAH2 1124 aa20.7■□□□□ 0.9
VRK1-201ENST00000216639 TAF6LQ9Y6J9 622 aa20.7■□□□□ 0.9
VRK1-201ENST00000216639 NPHP1O15259 732 aa20.7■□□□□ 0.9
VRK1-201ENST00000216639 PHF14O94880 888 aa20.7■□□□□ 0.9
VRK1-201ENST00000216639 C3orf67Q6ZVT6 689 aa20.7■□□□□ 0.9
VRK1-201ENST00000216639 PIH1D3Q9NQM4 214 aaKnown RBP20.7■□□□□ 0.9
VRK1-201ENST00000216639 ME3Q16798 604 aa20.69■□□□□ 0.9
VRK1-201ENST00000216639 CCDC83Q8IWF9 413 aa20.69■□□□□ 0.9
VRK1-201ENST00000216639 TPCN1Q9ULQ1 816 aa20.69■□□□□ 0.9
VRK1-201ENST00000216639 LARGE1O95461 756 aa20.68■□□□□ 0.9
VRK1-201ENST00000216639 MAP3K12Q12852 859 aa20.68■□□□□ 0.9
VRK1-201ENST00000216639 UBE4AQ14139 1066 aa20.68■□□□□ 0.9
VRK1-201ENST00000216639 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
VRK1-201ENST00000216639 PUS7LQ9H0K6 701 aaKnown RBP20.68■□□□□ 0.9
VRK1-201ENST00000216639 GNL3LQ9NVN8 582 aaKnown RBP20.68■□□□□ 0.9
VRK1-201ENST00000216639 C4AP0C0L4 1744 aa20.68■□□□□ 0.9
VRK1-201ENST00000216639 CARMIL3Q8ND23 1372 aa20.68■□□□□ 0.9
VRK1-201ENST00000216639 GPAA1O43292 621 aa20.67■□□□□ 0.9
VRK1-201ENST00000216639 PDIA4P13667 645 aaKnown RBP20.67■□□□□ 0.9
VRK1-201ENST00000216639 RASGRF1Q13972 1273 aa20.67■□□□□ 0.9
VRK1-201ENST00000216639 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
VRK1-201ENST00000216639 LRRC4BQ9NT99 713 aa20.67■□□□□ 0.9
VRK1-201ENST00000216639 CASZ1Q86V15 1759 aa20.67■□□□□ 0.9
VRK1-201ENST00000216639 FGD1P98174 961 aa20.67■□□□□ 0.9
VRK1-201ENST00000216639 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
VRK1-201ENST00000216639 DHX32Q7L7V1 743 aaKnown RBP20.67■□□□□ 0.9
VRK1-201ENST00000216639 SNAP23O00161 211 aa20.66■□□□□ 0.9
VRK1-201ENST00000216639 PDE6AP16499 860 aa20.66■□□□□ 0.9
VRK1-201ENST00000216639 BCAMP50895 628 aa20.66■□□□□ 0.9
VRK1-201ENST00000216639 RPS8P62241 208 aaKnown RBP20.66■□□□□ 0.9
VRK1-201ENST00000216639 AMIGO3Q86WK7 504 aa20.66■□□□□ 0.9
VRK1-201ENST00000216639 TCEANC2Q96MN5 208 aa20.66■□□□□ 0.9
VRK1-201ENST00000216639 MINPP1Q9UNW1 487 aa20.66■□□□□ 0.9
VRK1-201ENST00000216639 ZNF532Q9HCE3 1301 aa20.65■□□□□ 0.9
VRK1-201ENST00000216639 E7EWF7 191 aa20.65■□□□□ 0.9
VRK1-201ENST00000216639 CAVIN4Q5BKX8 364 aa20.65■□□□□ 0.9
VRK1-201ENST00000216639 ZNF772Q68DY9 489 aaPredicted RBP20.65■□□□□ 0.9
VRK1-201ENST00000216639 CELF1Q92879 486 aaKnown RBP20.65■□□□□ 0.9
VRK1-201ENST00000216639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.64■□□□□ 0.9
VRK1-201ENST00000216639 GJB2P29033 226 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms