RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 PTGS1P23219 599 aa21.56■■□□□ 1.04
MBD3-201ENST00000156825 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
MBD3-201ENST00000156825 PTPDC1A2A3K4 754 aa21.56■■□□□ 1.04
MBD3-201ENST00000156825 AKR1B10O60218 316 aa21.56■■□□□ 1.04
MBD3-201ENST00000156825 IL13P35225 146 aa21.56■■□□□ 1.04
MBD3-201ENST00000156825 KANK3Q6NY19 840 aa21.56■■□□□ 1.04
MBD3-201ENST00000156825 DBNDD2Q9BQY9 259 aa21.56■■□□□ 1.04
MBD3-201ENST00000156825 TBCAO75347 108 aaKnown RBP21.55■■□□□ 1.04
MBD3-201ENST00000156825 GRM1Q13255 1194 aa21.55■■□□□ 1.04
MBD3-201ENST00000156825 JADE2Q9NQC1 790 aa21.55■■□□□ 1.04
MBD3-201ENST00000156825 XRCC6P12956 609 aaKnown RBP eCLIP21.55■■□□□ 1.04
MBD3-201ENST00000156825 STX17P56962 302 aa21.55■■□□□ 1.04
MBD3-201ENST00000156825 CETN1Q12798 172 aa21.55■■□□□ 1.04
MBD3-201ENST00000156825 DYDC1Q8WWB3 177 aa21.55■■□□□ 1.04
MBD3-201ENST00000156825 DRC1Q96MC2 740 aa21.55■■□□□ 1.04
MBD3-201ENST00000156825 TTC12Q9H892 705 aaPredicted RBP21.55■■□□□ 1.04
MBD3-201ENST00000156825 SPTLC2O15270 562 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 GBP2P32456 591 aaPredicted RBP21.54■■□□□ 1.04
MBD3-201ENST00000156825 ASIC1P78348 528 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 ZNF804AQ7Z570 1209 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 A0A1B0GUL7 405 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 MBD4O95243 580 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 IFFO1Q0D2I5 559 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 TNNI2P48788 182 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 USP26Q9BXU7 913 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 GBP3Q9H0R5 595 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 TRIM35Q9UPQ4 493 aa21.54■■□□□ 1.04
MBD3-201ENST00000156825 BICD1Q96G01 975 aa21.53■■□□□ 1.04
MBD3-201ENST00000156825 TRIM75PA6NK02 468 aa21.53■■□□□ 1.04
MBD3-201ENST00000156825 WDHD1O75717 1129 aaPredicted RBP21.53■■□□□ 1.04
MBD3-201ENST00000156825 SPECC1Q5M775 1068 aa21.53■■□□□ 1.04
MBD3-201ENST00000156825 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
MBD3-201ENST00000156825 UHRF1BP1Q6BDS2 1440 aa21.53■■□□□ 1.04
MBD3-201ENST00000156825 MAPK8IP2Q13387 824 aaPredicted RBP21.52■■□□□ 1.04
MBD3-201ENST00000156825 ZRSR2Q15696 482 aaKnown RBP21.52■■□□□ 1.04
MBD3-201ENST00000156825 SNX21Q969T3 373 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 TBX22Q9Y458 520 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 ABCC10Q5T3U5 1492 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 PIK3C2GO75747 1445 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 CALM1P0DP23 149 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 CALM2P0DP24 149 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 CALM3P0DP25 149 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 SKILP12757 684 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 MCM7P33993 719 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 FAM173BQ6P4H8 233 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 CCDC171Q6TFL3 1326 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 PNMA6EA0A0J9YXQ4 647 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 NEMFO60524 1076 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 CTNNA2P26232 953 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 FAM200AQ8TCP9 573 aa21.52■■□□□ 1.04
MBD3-201ENST00000156825 ARID5AQ03989 594 aa21.51■■□□□ 1.03
MBD3-201ENST00000156825 SPAG5Q96R06 1193 aa21.51■■□□□ 1.03
MBD3-201ENST00000156825 ITGA6P23229 1130 aa21.51■■□□□ 1.03
MBD3-201ENST00000156825 RUFY3Q7L099 469 aa21.51■■□□□ 1.03
MBD3-201ENST00000156825 SAP30BPQ9UHR5 308 aaKnown RBP21.51■■□□□ 1.03
MBD3-201ENST00000156825 PRDM1O75626 825 aa21.51■■□□□ 1.03
MBD3-201ENST00000156825 CCDC150Q8NCX0 1101 aa21.51■■□□□ 1.03
MBD3-201ENST00000156825 PUS7Q96PZ0 661 aaKnown RBP21.51■■□□□ 1.03
MBD3-201ENST00000156825 FAM227BQ96M60 508 aa21.51■■□□□ 1.03
MBD3-201ENST00000156825 B4E1Z4 1266 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 TAF5LO75529 589 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 PCDH11XQ9BZA7 1347 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 PCDH11YQ9BZA8 1340 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 LDHBP07195 334 aaKnown RBP21.5■■□□□ 1.03
MBD3-201ENST00000156825 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 NYXQ9GZU5 481 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 USP19O94966 1318 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 CEP135Q66GS9 1140 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 SMARCC2Q8TAQ2 1214 aa21.5■■□□□ 1.03
MBD3-201ENST00000156825 SPDYE4A6NLX3 237 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 SYT1P21579 422 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 FAM114A1Q8IWE2 563 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 GNAQP50148 359 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 ALS2CR12Q96Q35 445 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 NCOA5Q9HCD5 579 aaKnown RBP21.49■■□□□ 1.03
MBD3-201ENST00000156825 PLS1Q14651 629 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 TRERF1Q96PN7 1200 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 RTL1A6NKG5 1358 aa21.49■■□□□ 1.03
MBD3-201ENST00000156825 EYA2O00167 538 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 TYRO3Q06418 890 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 UVSSAQ2YD98 709 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 MAP9Q49MG5 647 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 GOLGA6L7A0A1B0GV03 622 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 EIF6P56537 245 aaKnown RBP21.48■■□□□ 1.03
MBD3-201ENST00000156825 SP4Q02446 784 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 ERMNQ8TAM6 284 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 DNAI1Q9UI46 699 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 HDAC9Q9UKV0 1011 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 CCDC174Q6PII3 467 aa21.48■■□□□ 1.03
MBD3-201ENST00000156825 STXBP4Q6ZWJ1 553 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 PYM1Q9BRP8 204 aaKnown RBP21.47■■□□□ 1.03
MBD3-201ENST00000156825 ARMT1Q9H993 441 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 ZBTB21Q9ULJ3 1066 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 A0A1B0GVL5 298 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 CHL1O00533 1208 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 TNNI3KQ59H18 835 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 METTL22Q9BUU2 404 aaPredicted RBP21.47■■□□□ 1.03
MBD3-201ENST00000156825 RMND1Q9NWS8 449 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms