RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Rbm10Q99KG3 930 aaKnown RBP17.96■□□□□ 0.47
Upf1-202ENSMUST00000215817 Cyp24a1Q64441 514 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 GakQ99KY4 1305 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Nlrp1aQ2LKU9 1182 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Lrrcc1Q69ZB0 1026 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Itsn1Q9Z0R4 1714 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Nucb1Q02819 459 aaKnown RBP17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 NaspQ99MD9 773 aaKnown RBP17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Eif6O55135 245 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Prkg1P0C605 671 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Nek11Q8C0Q4 628 aa17.95■□□□□ 0.46
Upf1-202ENSMUST00000215817 Ezh2Q61188 746 aaKnown RBP17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 DymQ8CHY3 669 aa17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 Slc4a8Q8JZR6 1089 aa17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 Spire2Q8K1S6 718 aa17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 NfkbibQ60778 359 aa17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 Gm973E9Q295 1059 aa17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 Celf1P28659 486 aaKnown RBP17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 Cep57l1Q8VDS7 400 aa17.94■□□□□ 0.46
Upf1-202ENSMUST00000215817 Cdkl5Q3UTQ8 938 aa17.93■□□□□ 0.46
Upf1-202ENSMUST00000215817 DbnlQ62418 436 aa17.93■□□□□ 0.46
Upf1-202ENSMUST00000215817 Slx4ipQ9D7Y9 413 aa17.93■□□□□ 0.46
Upf1-202ENSMUST00000215817 Homer1Q9Z2Y3 366 aa17.93■□□□□ 0.46
Upf1-202ENSMUST00000215817 Adamtsl3G3UXC7 1706 aa17.93■□□□□ 0.46
Upf1-202ENSMUST00000215817 Stk38Q91VJ4 465 aa17.93■□□□□ 0.46
Upf1-202ENSMUST00000215817 DmtnQ9WV69 405 aa17.93■□□□□ 0.46
Upf1-202ENSMUST00000215817 Tekt3Q6X6Z7 490 aa17.92■□□□□ 0.46
Upf1-202ENSMUST00000215817 Strip1Q8C079 837 aa17.92■□□□□ 0.46
Upf1-202ENSMUST00000215817 Ak2Q9WTP6 239 aa17.92■□□□□ 0.46
Upf1-202ENSMUST00000215817 Ifit2Q64112 472 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 DlatQ8BMF4 642 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Fam43aQ8BUP8 424 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Mlh1Q9JK91 760 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Prl3d1P18121 224 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Gpatch3Q8BIY1 525 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Smc2Q8CG48 1191 aaKnown RBP17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Tmc2Q8R4P4 888 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Ehd4Q9EQP2 541 aa17.91■□□□□ 0.46
Upf1-202ENSMUST00000215817 Cyp2d11P24457 504 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Dusp9Q7TNL7 452 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Ift57Q8BXG3 429 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Lonrf3Q9D4H7 753 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Mast3Q3U214 1321 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Calcoco2A2A6M5 331 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Nkx2-3P97334 362 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Gtf3c5Q8R2T8 520 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 PsdQ5DTT2 1024 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Isy1Q69ZQ2 285 aaKnown RBP17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Ddx31Q6NZQ2 687 aaKnown RBP17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Pdia6Q922R8 440 aaKnown RBP17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 WtapQ9ER69 396 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Hmg20bQ9Z104 317 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Gm4340L7N2C4 268 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Gtpbp6Q3U6U5 514 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Fam84aQ9D650 292 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Appbp2Q9DAX9 585 aa17.9■□□□□ 0.46
Upf1-202ENSMUST00000215817 Eddm13E9Q7F5 164 aa17.89■□□□□ 0.45
Upf1-202ENSMUST00000215817 Adcy9P51830 1353 aa17.89■□□□□ 0.45
Upf1-202ENSMUST00000215817 Mybbp1aQ7TPV4 1344 aaKnown RBP17.89■□□□□ 0.45
Upf1-202ENSMUST00000215817 AK157302I3ITR1 129 aa17.89■□□□□ 0.45
Upf1-202ENSMUST00000215817 Tuft1O08970 390 aa17.89■□□□□ 0.45
Upf1-202ENSMUST00000215817 Isca1Q9D924 129 aa17.89■□□□□ 0.45
Upf1-202ENSMUST00000215817 Stag1Q9D3E6 1258 aa17.89■□□□□ 0.45
Upf1-202ENSMUST00000215817 Plcb3P51432 1234 aaKnown RBP17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Gm21985Q6P6P5 1106 aa17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Glt1d1A4FUP9 346 aa17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Cyp19a1P28649 503 aa17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Triml1Q8BVP1 470 aa17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 PrimpolQ6P1E7 537 aa17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Larp6Q8BN59 492 aa17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Cdc45Q9Z1X9 566 aa17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Metap2O08663 478 aaKnown RBP17.88■□□□□ 0.45
Upf1-202ENSMUST00000215817 Samd1D3YXK1 519 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Tpm2P58774 284 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Traf3ip1Q149C2 625 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Igf2bp2Q5SF07 592 aaKnown RBP17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Myl10Q62082 202 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Stn1Q8K2X3 378 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Cyp2c69E9PXC3 491 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Cyp2c40P56657 491 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Prdm1Q60636 856 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Ciapin1Q8WTY4 309 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Brwd3A2AHJ4 1799 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Gnat2P50149 354 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Clip2Q9Z0H8 1047 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Mtmr2Q9Z2D1 643 aa17.87■□□□□ 0.45
Upf1-202ENSMUST00000215817 Osbpl5Q9ER64 874 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 GabrdP22933 449 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 AbraQ8BUZ1 375 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 ZwintQ9CQU5 252 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 Pik3ap1Q9EQ32 811 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 Usp32F8VPZ3 1604 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 Slc27a3O88561 667 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 RdxP26043 583 aaKnown RBP17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 Kank4Q6P9J5 1016 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 Igfbp6P47880 238 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 Fam198bQ3UPI1 517 aa17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 McamQ8R2Y2 648 aaKnown RBP17.86■□□□□ 0.45
Upf1-202ENSMUST00000215817 Zbtb7aO88939 569 aaKnown RBP17.85■□□□□ 0.45
Upf1-202ENSMUST00000215817 Utp3Q9JI13 469 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms