RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Pde4dQ01063 747 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ice2Q3UZ18 988 aaKnown RBP12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 DpydQ8CHR6 1025 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Mad1l1Q9WTX8 717 aaKnown RBP12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Irgm2A0A140LIF8 407 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Cyb5rlB1AS42 316 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Eef2kO08796 724 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Prl7a2O54831 253 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Rbm17Q8JZX4 405 aaKnown RBP12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ginm1Q91WR6 327 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Bcl2l12Q9D3J3 255 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Abca3Q8R420 1704 aa12.33□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Psen1P49769 467 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ftl2P49945 183 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Lrriq3Q14DL3 633 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Wdr93Q402B2 695 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 SrrtQ99MR6 875 aaKnown RBP12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Rdm1Q9CQK3 281 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 TnksQ6PFX9 1320 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Cops6O88545 324 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Gpr182P43142 395 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 FanccP50652 591 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Rab3gap1Q80UJ7 981 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Zkscan8Q8BSL0 588 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 4930548H24RikQ9D496 437 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Sytl4Q9R0Q1 673 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 MetP16056 1379 aa12.32□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Plcb3P51432 1234 aaKnown RBP12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ankrd23Q812A3 306 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Usp44Q8C2S0 711 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ssc5dQ8BV57 1371 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Kif3cO35066 796 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 RdxP26043 583 aaKnown RBP12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 ErmnQ5EBJ4 281 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ccdc66Q6NS45 935 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Npc1l1Q6T3U4 1333 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Naa30Q8CES0 364 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ccne2Q9Z238 404 aa12.31□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Col22a1E9Q7P1 1613 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Qtrt2B8ZXI1 415 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Speer4f2E9Q366 295 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 TsksO54887 585 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Slfnl1Q8BHW9 410 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ptcd1Q8C2E4 695 aaKnown RBP12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ccdc158Q8CDI6 1109 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 NaspQ99MD9 773 aaKnown RBP12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Bloc1s2Q9CWG9 143 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 SetQ9EQU5 289 aaKnown RBP12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Rapgef4Q9EQZ6 1011 aa12.3□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Hspd1P63038 573 aaKnown RBP12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ctdnep1Q3TP92 244 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Cyp7a1Q64505 503 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Trim56Q80VI1 734 aaKnown RBP12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Rnf214Q8BFU3 668 aaKnown RBP12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Iffo2Q8R2V2 512 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 IncenpQ9WU62 880 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Arap2Q8BZ05 1703 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Kdm3aQ6PCM1 1323 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Zbtb38Q3LR78 1197 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 AidaQ8C4Q6 305 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Rassf4Q8CB96 322 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Anapc4Q91W96 807 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Psrc1Q9D0P7 329 aa12.29□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Aox1O54754 1333 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Cspp1B2RX88 1205 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Stat1P42225 749 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Pcmtd1P59913 357 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Atp8a2P98200 1148 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ddb1Q3U1J4 1140 aaKnown RBP12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ppp1r10Q80W00 888 aaKnown RBP12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Samm50Q8BGH2 469 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Me3Q8BMF3 604 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ccdc178Q8CDV0 866 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Cep57l1Q8VDS7 400 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Prr5lA2AVJ5 370 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Cyp3a57D3YYZ0 503 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Miga2Q8BK03 593 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Fam177a1Q8BR63 207 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Zfp113Q8C689 439 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 CenpqQ9CPQ5 267 aa12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ppil4Q9CXG3 492 aaKnown RBP12.28□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Trim34bJ3QNR8 485 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ube2hP62257 183 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Gabpb2P81069 414 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Leo1Q5XJE5 667 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Itga6Q61739 1091 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Casc1Q6TDU8 730 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Ppp6r1Q7TSI3 856 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Tubb6Q922F4 447 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Zbtb22Q9Z0G7 638 aa12.27□□□□□ -0.44
Ptpre-208ENSMUST00000211788 Mast2Q60592 1734 aa12.27□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Cd22P35329 862 aa12.27□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Spty2d1Q68FG3 682 aa12.27□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Tmem67Q8BR76 992 aa12.27□□□□□ -0.45
Ptpre-208ENSMUST00000211788 ZwintQ9CQU5 252 aa12.27□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Foxo4Q9WVH3 505 aa12.27□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Mx2Q9WVP9 655 aa12.27□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Lrp6O88572 1613 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Fbxl16A2RT62 479 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 CgnP59242 1191 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms