RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Ccdc138Q0VF22 680 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ttc41Q692V3 1318 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Arid3cA6PWV5 409 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Map3k13Q1HKZ5 959 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 PalmQ9Z0P4 383 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 CalcaP70160 136 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Lrsam1Q80ZI6 727 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Camsap2Q8C1B1 1461 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cct6aP80317 531 aaKnown RBP6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tbc1d4Q8BYJ6 1307 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cyp26c1B2RXA7 518 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 MycnP03966 462 aaKnown RBP6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Gas2l2Q5SSG4 860 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ccdc28bQ8CEG5 200 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tceanc2Q8R2M0 207 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ddx23D3Z0M9 819 aaKnown RBP6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ano1Q8BHY3 960 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Coro1cQ9WUM4 474 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Mroh9G5E8L9 891 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 DesP31001 469 aaKnown RBP6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Dab2P98078 766 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Nuf2Q99P69 463 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 CltaO08585 235 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Dapk3O54784 448 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ccdc160Q3UYG1 323 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 EmbP21995 330 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tmcc1Q69ZZ6 649 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 ByslO54825 436 aaKnown RBP6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Utp18Q5SSI6 552 aaKnown RBP6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cdc37Q61081 379 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Arhgap30Q640N3 1101 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Utp6Q8VCY6 597 aaKnown RBP6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 TchhA0A0B4J1F9 1599 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Fam81bA0A140LI28 432 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tdrd9Q14BI7 1383 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Osbpl1aQ91XL9 950 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Bmp2kQ91Z96 1138 aa6.88□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Rtel1Q0VGM9 1203 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tpd52Q62393 224 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Txndc16Q7TN22 820 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Arhgap24Q8C4V1 747 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Spice1Q8C804 860 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 MpripP97434 1024 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ppfia2Q8BSS9 1257 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 IqcdQ9D3V1 458 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Synj1Q8CHC4 1574 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cyth3O08967 399 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Oxsr1Q6P9R2 527 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Krt75Q8BGZ7 551 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Krt222Q8CCX5 294 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Sept8Q8CHH9 429 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Fyb1O35601 819 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Slc7a3P70423 618 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Q8BZJ8 459 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cfap57Q9D180 1249 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Abl1P00520 1123 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 RpsaP14206 295 aaKnown RBP6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Pwp2Q8BU03 919 aaKnown RBP6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Rad54l2Q99NG0 1466 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Stim2P83093 746 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ppfia1B2RXQ2 1266 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Znf148Q61624 794 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Slc26a8Q8R0C3 999 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ppp6r3Q922D4 844 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Lemd3Q9WU40 921 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Eef1dP57776 281 aaKnown RBP6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ggnbp2Q5SV77 696 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ift88Q61371 824 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Znf532Q6NXK2 1036 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cep104Q80V31 926 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Atp2a3Q64518 1038 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Xpo4Q9ESJ0 1151 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Gkap1Q9JMB0 366 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Wdr46Q9Z0H1 622 aaKnown RBP6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cep128Q8BI22 1102 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ulbp1Q8HWA3 334 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Cux1P53564 1515 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Sept2P42208 361 aaKnown RBP6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ttc27Q8CD92 847 aa6.87□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Kifc2O08672 792 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ino80bQ99PT3 375 aaKnown RBP6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 PalmdQ9JHU2 551 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ap3b2Q9JME5 1082 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Washc4Q3UMB9 1173 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Atp6v0a4Q920R6 833 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tpcn1Q9EQJ0 817 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Gm6583E9Q8Z1 469 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Shq1Q7TMX5 569 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tsr2Q8C8T8 191 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Pde4cQ3UEI1 686 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Fhdc1Q3ULZ2 1149 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Tti2Q8BGV4 512 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Wasf1Q8R5H6 559 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Nphp3Q7TNH6 1325 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ttll3A4Q9E5 927 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Rmi1Q9D4G9 616 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Lire1P11260 357 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 CactinQ9CS00 772 aaKnown RBP6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Ndufa13Q9ERS2 144 aa6.86□□□□□ -1.31
Ubr4-212ENSMUST00000165860 Atf7ipQ7TT18 1306 aa6.86□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms