RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Vars2Q3U2A8 1060 aa30.65■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Mroh6V9GX81 722 aa30.65■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Popdc2Q9ES82 367 aa30.65■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Kiaa0319Q5SZV5 1081 aa30.64■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Tceanc2Q8R2M0 207 aa30.64■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Smc3Q9CW03 1217 aaKnown RBP30.64■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Lgr5Q9Z1P4 907 aa30.64■■■□□ 2.5
Tpm1-216ENSMUST00000113707 McamQ8R2Y2 648 aaKnown RBP30.63■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Znf609Q8BZ47 1413 aa30.63■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Ccdc158Q8CDI6 1109 aa30.63■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Sde2Q8K1J5 448 aaKnown RBP30.63■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Carmil3Q3UFQ8 1375 aa30.63■■■□□ 2.49
Tpm1-216ENSMUST00000113707 HdlbpQ8VDJ3 1268 aaKnown RBP30.62■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Nup98Q6PFD9 1816 aaKnown RBP30.62■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Sik3Q6P4S6 1311 aa30.62■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Rps8P62242 208 aaKnown RBP30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Tmem67Q8BR76 992 aa30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 CpvlQ9D3S9 478 aa30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Usp42B2RQC2 1324 aaKnown RBP30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Gm7347D3YYI9 267 aa30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Speer4aF8VPX6 267 aa30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Pim2Q62070 370 aa30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Naa16Q9DBB4 864 aa30.61■■■□□ 2.49
Tpm1-216ENSMUST00000113707 IntuQ059U7 942 aa30.6■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Osbpl5Q9ER64 874 aa30.6■■■□□ 2.49
Tpm1-216ENSMUST00000113707 ParvgQ9ERD8 331 aa30.6■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Heg1E9Q7X6 1337 aa30.59■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Aknad1E9Q8N6 675 aa30.59■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Pla2g4fQ50L41 855 aa30.59■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Atad2Q8CDM1 1040 aa30.59■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Adarb2Q9JI20 745 aa30.59■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Snapc4Q8BP86 1333 aa30.58■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Myh3P13541 1940 aa30.58■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Izumo3A6PWV3 263 aa30.58■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Pcdhb9E9Q5G2 828 aa30.58■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Gm21985Q6P6P5 1106 aa30.58■■■□□ 2.49
Tpm1-216ENSMUST00000113707 Alx1Q8C8B0 326 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 ImmtQ8CAQ8 757 aaKnown RBP30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 FliiQ9JJ28 1271 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Sh3tc1G3X9F6 1346 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Il15P48346 162 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Mcm4P49717 862 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Tlr8P58682 1032 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Pram1Q6BCL1 675 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 PogkQ80TC5 607 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Kif13bA0A286YCV9 1847 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Phrf1A6H619 1682 aa30.57■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Col11a2Q64739 1736 aa30.56■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Cyp2d9P11714 504 aa30.56■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Eef2kO08796 724 aa30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Prl7d1P04769 244 aa30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Casp1P29452 402 aa30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Slc7a3P70423 618 aa30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Ppp1r10Q80W00 888 aaKnown RBP30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Map3k15A2AQW0 1331 aa30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Sh3bp5lQ99LH9 392 aa30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Pde3aQ9Z0X4 1141 aa30.55■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Exosc10P56960 887 aaKnown RBP30.54■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Spty2d1Q68FG3 682 aa30.54■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Ube3cQ80U95 1083 aa30.54■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Zfp804bA0A0G2JGH6 1343 aa30.54■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Spata31d1bE9QA57 1361 aa30.54■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Sept12Q9D451 317 aa30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Irs4Q9Z0Y7 1216 aa30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 MeiocA2AG06 965 aa30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Stat1P42225 749 aa30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 FanccP50652 591 aa30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Rhbdl3P58873 404 aa30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Washc4Q3UMB9 1173 aa30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 DekQ7TNV0 380 aaKnown RBP30.53■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Mast3Q3U214 1321 aa30.52■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Oas2E9Q9A9 742 aa30.52■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Cpa2Q504N0 417 aa30.52■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Gripap1Q8VD04 806 aa30.52■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Stx6Q9JKK1 255 aa30.52■■■□□ 2.48
Tpm1-216ENSMUST00000113707 Celf1P28659 486 aaKnown RBP30.51■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Ccdc9Q8VC31 543 aaKnown RBP30.51■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Myh15E9Q264 1925 aa30.51■■■□□ 2.47
Tpm1-216ENSMUST00000113707 NppbP40753 121 aa30.5■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Ncaph2Q8BSP2 607 aa30.5■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Sumf1Q8R0F3 372 aa30.5■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Dydc2Q9D3X8 139 aa30.5■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Hand2Q61039 217 aa30.5■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Akt1s1Q9D1F4 257 aa30.5■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Frmd7A2AD83 703 aa30.49■■■□□ 2.47
Tpm1-216ENSMUST00000113707 ErmnQ5EBJ4 281 aa30.49■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Lmod1Q8BVA4 595 aa30.49■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Shisa4Q8CA71 197 aa30.49■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Ankrd63A2ARS0 390 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Atxn2lQ7TQH0 1049 aaKnown RBP30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 HlfQ8BW74 295 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Strip1Q8C079 837 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Rbm5Q91YE7 815 aaKnown RBP30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Aox1O54754 1333 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Pald1P70261 859 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Sept9Q80UG5 583 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 BrapQ99MP8 591 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 MthfsQ9D110 203 aa30.48■■■□□ 2.47
Tpm1-216ENSMUST00000113707 4933416C03RikQ3V063 378 aa30.47■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Pes1Q9EQ61 584 aaKnown RBP30.47■■■□□ 2.47
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms