RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Tsr2Q8C8T8 191 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Cchcr1Q8K2I2 770 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Ppp4r3bQ922R5 820 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Akt1s1Q9D1F4 257 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Ube4aE9Q735 1028 aa17.63■□□□□ 0.41
Nup88-202ENSMUST00000108530 Lmod1Q8BVA4 595 aa17.63■□□□□ 0.41
Nup88-202ENSMUST00000108530 SnrkQ8VDU5 748 aa17.63■□□□□ 0.41
Nup88-202ENSMUST00000108530 Sf3b3Q921M3 1217 aaKnown RBP17.63■□□□□ 0.41
Nup88-202ENSMUST00000108530 Celf1P28659 486 aaKnown RBP17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Tmem67Q8BR76 992 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Cfap44E9Q5M6 1843 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Col22a1E9Q7P1 1613 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Duox1A2AQ92 1551 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Zfp804bA0A0G2JGH6 1343 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Gm45015A0A140LII9 184 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Gm18336A0A140LIU8 765 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Appbp2Q9DAX9 585 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Mroh6V9GX81 722 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Ubn2Q80WC1 1314 aa17.62■□□□□ 0.41
Nup88-202ENSMUST00000108530 Vsig10D3YX43 558 aa17.61■□□□□ 0.41
Nup88-202ENSMUST00000108530 Spty2d1Q68FG3 682 aa17.61■□□□□ 0.41
Nup88-202ENSMUST00000108530 Shisa4Q8CA71 197 aa17.61■□□□□ 0.41
Nup88-202ENSMUST00000108530 Ccdc158Q8CDI6 1109 aa17.61■□□□□ 0.41
Nup88-202ENSMUST00000108530 Fbxo3Q9DC63 480 aa17.61■□□□□ 0.41
Nup88-202ENSMUST00000108530 Sumf1Q8R0F3 372 aa17.61■□□□□ 0.41
Nup88-202ENSMUST00000108530 Ube3cQ80U95 1083 aa17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 Smc3Q9CW03 1217 aaKnown RBP17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 Snapc4Q8BP86 1333 aa17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 Gm7347D3YYI9 267 aa17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 Speer4aF8VPX6 267 aa17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 Sept9Q80UG5 583 aa17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 HlfQ8BW74 295 aa17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 Osbpl5Q9ER64 874 aa17.6■□□□□ 0.41
Nup88-202ENSMUST00000108530 CpzQ8R4V4 654 aa17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 IcoslgQ9JHJ8 322 aa17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Cyp2d34L7N463 504 aa17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Zbtb7aO88939 569 aaKnown RBP17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Mcm4P49717 862 aa17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Kif20aP97329 887 aa17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Pim2Q62070 370 aa17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 McamQ8R2Y2 648 aaKnown RBP17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Rbm5Q91YE7 815 aaKnown RBP17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Sytl4Q9R0Q1 673 aa17.59■□□□□ 0.41
Nup88-202ENSMUST00000108530 Usp42B2RQC2 1324 aaKnown RBP17.58■□□□□ 0.41
Nup88-202ENSMUST00000108530 Rps8P62242 208 aaKnown RBP17.58■□□□□ 0.41
Nup88-202ENSMUST00000108530 Sde2Q8K1J5 448 aaKnown RBP17.58■□□□□ 0.41
Nup88-202ENSMUST00000108530 Naa16Q9DBB4 864 aa17.58■□□□□ 0.41
Nup88-202ENSMUST00000108530 ParvgQ9ERD8 331 aa17.58■□□□□ 0.41
Nup88-202ENSMUST00000108530 Myh7Q91Z83 1935 aa17.58■□□□□ 0.4
Nup88-202ENSMUST00000108530 1700006A11RikB9EHI3 544 aa17.58■□□□□ 0.4
Nup88-202ENSMUST00000108530 Pcdhb9E9Q5G2 828 aa17.58■□□□□ 0.4
Nup88-202ENSMUST00000108530 Usp48Q3V0C5 1052 aa17.58■□□□□ 0.4
Nup88-202ENSMUST00000108530 Bms1Q6PGF5 1284 aaKnown RBP17.58■□□□□ 0.4
Nup88-202ENSMUST00000108530 Abtb2Q7TQI7 1024 aa17.58■□□□□ 0.4
Nup88-202ENSMUST00000108530 Ppfia3P60469 1194 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 Ctdnep1Q3TP92 244 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 Washc4Q3UMB9 1173 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 Sh3bp5lQ99LH9 392 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 Adarb2Q9JI20 745 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 EvplQ9D952 2035 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 Ly75Q60767 1723 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 Vars2Q3U2A8 1060 aa17.57■□□□□ 0.4
Nup88-202ENSMUST00000108530 Krt24A1L317 512 aa17.56■□□□□ 0.4
Nup88-202ENSMUST00000108530 Il17raQ60943 864 aa17.56■□□□□ 0.4
Nup88-202ENSMUST00000108530 Irs4Q9Z0Y7 1216 aa17.56■□□□□ 0.4
Nup88-202ENSMUST00000108530 Scn11aQ9R053 1765 aa17.56■□□□□ 0.4
Nup88-202ENSMUST00000108530 Acap3Q6NXL5 833 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Msl1Q6PDM1 616 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Nme8Q715T0 586 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Sik3Q6P4S6 1311 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Gadd45bP22339 160 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Gm21985Q6P6P5 1106 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Map3k15A2AQW0 1331 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Kif13bA0A286YCV9 1847 aa17.55■□□□□ 0.4
Nup88-202ENSMUST00000108530 Col11a2Q64739 1736 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Ubr3Q5U430 1889 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Eef2kO08796 724 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 FanccP50652 591 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Rhbdl3P58873 404 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Babam1Q3UI43 333 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Fam170aQ66LM6 333 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Atxn2lQ7TQH0 1049 aaKnown RBP17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Stx6Q9JKK1 255 aa17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Nup98Q6PFD9 1816 aaKnown RBP17.54■□□□□ 0.4
Nup88-202ENSMUST00000108530 Oas2E9Q9A9 742 aa17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 FliiQ9JJ28 1271 aa17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Col3a1P08121 1464 aa17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Ankrd63A2ARS0 390 aa17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Mapkapk5O54992 473 aa17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Rbm26Q6NZN0 1012 aaKnown RBP17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Rbm15bQ6PHZ5 887 aaKnown RBP17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Ces1dQ8VCT4 565 aa17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Pes1Q9EQ61 584 aaKnown RBP17.53■□□□□ 0.4
Nup88-202ENSMUST00000108530 Gm29094F6Q785 221 aa17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 Exosc10P56960 887 aaKnown RBP17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 Cct2P80314 535 aaKnown RBP17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 Fam198bQ3UPI1 517 aa17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 DpydQ8CHR6 1025 aa17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 Pms1Q8K119 917 aa17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 Ipo4Q8VI75 1082 aa17.52■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms