RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Nfe2l3Q9WTM4 660 aa15.29■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Rab3gap1Q80UJ7 981 aa15.28■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Zkscan8Q8BSL0 588 aa15.28■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Lman1lQ8VCD3 505 aa15.28■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Ciao1Q99KN2 339 aa15.28■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Tceal9Q9DD24 104 aa15.28■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Ripk3Q9QZL0 486 aa15.28■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Peak1Q69Z38 1735 aa15.28■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Scn11aQ9R053 1765 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Mast3Q3U214 1321 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Stk36Q69ZM6 1316 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Arid4aF8VPQ2 1261 aaKnown RBP15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Speer4dL7N216 212 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Slain1Q68FF7 579 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Pxylp1Q8BHA9 480 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Tmem87bQ8BKU8 555 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Q8C5K5 320 aa15.27■□□□□ 0.04
Ccdc28b-202ENSMUST00000106035 Sult6b1P0CC03 303 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Npr3P70180 536 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 WasP70315 520 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Gm5592Q3V0A6 857 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Akap4Q60662 849 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Atg9aQ68FE2 551 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Nutm1Q8BHP2 1126 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Znf330Q922H9 316 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 SisF8VQM5 1818 aa15.26■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 GabreA2AMW3 916 aa15.25■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Ankrd44B2RXR6 993 aa15.25■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 UncxO08934 530 aa15.25■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 AppP12023 770 aa15.25■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Q3UJP5 209 aa15.25■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Slc44a4Q91VA1 707 aa15.25■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Aldh1b1Q9CZS1 519 aa15.25■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Ankrd63A2ARS0 390 aa15.24■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Spg7Q3ULF4 781 aa15.24■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Ripk4Q9ERK0 786 aa15.24■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 LratQ9JI60 231 aa15.24■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Ddx20Q9JJY4 825 aaKnown RBP15.24■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 CpdO89001 1377 aa15.24■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Arrdc4A0A0B4J1F4 415 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Gm4340L7N2C4 268 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 HunkO88866 714 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 LtbrP50284 415 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 OsbpQ3B7Z2 805 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Tll1Q62381 1013 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Irs4Q9Z0Y7 1216 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Scn10aQ6QIY3 1958 aa15.23■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Kdm3aQ6PCM1 1323 aa15.22■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Spata18Q0P557 537 aa15.22■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Cog5Q8C0L8 829 aa15.22■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Lama2Q60675 3118 aaKnown RBP15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Myh15E9Q264 1925 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Gnai2P08752 355 aaKnown RBP15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Slc10a4Q3UEZ8 437 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Kiaa0753Q6A000 959 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Mxd3Q80US8 206 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Dhx38Q80X98 1228 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Epc2Q8C0I4 808 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Aldh1l2Q8K009 923 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Tmc2Q8R4P4 888 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Sirt2Q8VDQ8 389 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Tmem79Q9D709 391 aa15.21■□□□□ 0.03
Ccdc28b-202ENSMUST00000106035 Prpmp5E9PXN1 296 aa15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Myo1bP46735 1107 aa15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Adamts19P59509 1210 aa15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Evi5P97366 809 aa15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Kif22Q3V300 660 aa15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Ufl1Q8CCJ3 793 aaKnown RBP15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Rbm33Q9CXK9 1231 aaKnown RBP15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Stag1Q9D3E6 1258 aa15.2■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 A0A1W2P7S8 802 aa15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Ier5O89113 308 aa15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Prkar2bP31324 416 aa15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Sept1P42209 366 aa15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Cdc5lQ6A068 802 aaKnown RBP15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Secisbp2lQ6A098 1086 aaKnown RBP15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Maco1Q7TQE6 664 aaKnown RBP15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Rrs1Q9CYH6 365 aaKnown RBP15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 EhhadhQ9DBM2 718 aa15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Myh4Q5SX39 1939 aa15.19■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Fgl2P12804 432 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Fgd1P52734 960 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Atp2b3Q0VF55 1220 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Znf692Q3U381 531 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Ppp4r3aQ6P2K6 820 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 SpidrQ8BGX7 933 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Prg3Q9JL95 222 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Letm1Q9Z2I0 738 aa15.18■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Sik3Q6P4S6 1311 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Chd5A2A8L1 1946 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Pa2g4P50580 394 aaKnown RBP15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Nlrp1aQ2LKU9 1182 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Ttll12Q3UDE2 639 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Tmprss11eQ5S248 423 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Sept9Q80UG5 583 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Ift57Q8BXG3 429 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Dis3l2Q8CI75 870 aaKnown RBP15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 MvpQ9EQK5 861 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 B3galt4Q9Z0F0 371 aa15.17■□□□□ 0.02
Ccdc28b-202ENSMUST00000106035 Izumo3A6PWV3 263 aa15.16■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms