RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 MetP16056 1379 aa12.18□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Znf18Q810A1 556 aa12.18□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Amigo3Q8C2S7 508 aa12.18□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Lmbrd2Q8C561 694 aa12.18□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Pnpla7A2AJ88 1352 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Afg3l2Q8JZQ2 802 aaKnown RBP12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Rps8P62242 208 aaKnown RBP12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Polr3gQ6NXY9 223 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Nup133Q8R0G9 1155 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 BrapQ99MP8 591 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Kiaa0319lQ8K135 1048 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Krt82Q99M74 516 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Gm4340L7N2C4 268 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 LyarQ08288 388 aaKnown RBP12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ipo7Q9EPL8 1038 aaKnown RBP12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ube3bQ9ES34 1070 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ltb4r2Q9JJL9 360 aa12.17□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Mcm4P49717 862 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Traf3ip1Q149C2 625 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Hmgn5Q9JL35 406 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ccdc173A0JLY1 547 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Tpm4Q6IRU2 248 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ccdc39Q9D5Y1 937 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ush1cQ9ES64 910 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Phlpp1Q8CHE4 1687 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Metap2O08663 478 aaKnown RBP12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Trim30aP15533 496 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Pim2Q62070 370 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ptcd1Q8C2E4 695 aaKnown RBP12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Setdb1O88974 1307 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ces1hD3Z298 562 aa12.16□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Crb1Q8VHS2 1405 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Bin2D3Z6Q9 489 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ces1aE9PYP1 563 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Nap1l2P51860 460 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ncaph2Q8BSP2 607 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Il15P48346 162 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Fam228bQ497Q6 232 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Sgsm2Q80U12 1005 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Ttc12Q8BW49 704 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Klf15Q9EPW2 415 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Igbp1bQ9QZ29 343 aa12.15□□□□□ -0.46
Ldb3-205ENSMUST00000090040 Cfap58B2RW38 873 aa12.15□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Fkbp1aP26883 108 aaKnown RBP12.15□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Kiaa0754Q69ZZ9 979 aa12.15□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Ccdc66Q6NS45 935 aa12.15□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Susd4Q8BH32 490 aa12.15□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Pcdhb22Q91XZ8 794 aa12.15□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Ppil4Q9CXG3 492 aaKnown RBP12.15□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Bcl2l12Q9D3J3 255 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Sos2Q02384 1333 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Cyp26c1B2RXA7 518 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Gtf2f1Q3THK3 508 aaKnown RBP12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 TnmdQ9EP64 317 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 WtapQ9ER69 396 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Sel1lQ9Z2G6 790 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Arhgap33Q80YF9 1305 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 GalcP54818 684 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Ccdc34Q3UI66 367 aa12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 SrrtQ99MR6 875 aaKnown RBP12.14□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Terf1P70371 421 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 F2rP30558 430 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Map2P20357 1828 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Atp2b4Q6Q477 1205 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Bcl11aQ9QYE3 773 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Tns2Q8CGB6 1400 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Slc1a4O35874 532 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Msl1Q6PDM1 616 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Phf23Q8BSN5 401 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Amhr2Q8K592 568 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 BccipQ9CWI3 316 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Adarb2Q9JI20 745 aa12.13□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Rnf214Q8BFU3 668 aaKnown RBP12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Arfgef2A2A5R2 1792 aa12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Arid3aQ62431 601 aa12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Ccdc178Q8CDV0 866 aa12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Cyp2c23E9Q5K4 494 aa12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Prl7a2O54831 253 aa12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Nkx2-3P97334 362 aa12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Trpm3Q5F4S9 1721 aa12.12□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Brwd3A2AHJ4 1799 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Cyp3a57D3YYZ0 503 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Samm50Q8BGH2 469 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Gm45015A0A140LII9 184 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Gm18336A0A140LIU8 765 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 MeiocA2AG06 965 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Ube2hP62257 183 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Slc38a10Q5I012 1090 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 U2af1l4Q8BGJ9 220 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Bloc1s4Q8VED2 215 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Srgap1Q91Z69 1062 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Wdr33Q8K4P0 1330 aaKnown RBP12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Dhx8A2A4P0 1244 aaKnown RBP12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Fam184aE9PW83 1143 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Gm29094F6Q785 221 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Fchsd1Q6PFY1 688 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Gdpd2Q9ESM6 539 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Sil1Q9EPK6 465 aa12.11□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Cyp19a1P28649 503 aa12.1□□□□□ -0.47
Ldb3-205ENSMUST00000090040 Hspd1P63038 573 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms