RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 2310002L09RikQ9D7L5 217 aa16.27■□□□□ 0.2
Col2a1-202ENSMUST00000088355 NcapgE9PWG6 1004 aa16.27■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Kiaa1211Q5PR69 1207 aa16.27■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Dydc1Q9D9T0 175 aa16.27■□□□□ 0.2
Col2a1-202ENSMUST00000088355 Depdc5P61460 1591 aa16.27■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Exoc8Q6PGF7 716 aa16.27■□□□□ 0.19
Col2a1-202ENSMUST00000088355 MarcksP26645 309 aaKnown RBP16.27■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Gtf3c5Q8R2T8 520 aa16.27■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Snap23O09044 210 aa16.26■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Aifm3Q3TY86 605 aa16.26■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Ift122Q6NWV3 1182 aa16.26■□□□□ 0.19
Col2a1-202ENSMUST00000088355 AlkP97793 1621 aa16.26■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Zbtb45Q52KG4 520 aa16.26■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Def6Q8C2K1 630 aa16.26■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Gjc1P28229 396 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Mmel1Q9JLI3 765 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 AU022751B1B0V2 589 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Ano1Q8BHY3 960 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Hdac6Q9Z2V5 1149 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 AceP09470 1312 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Ccdc191J3QQ27 883 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Tut1Q8R3F9 869 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Znf608Q56A10 1511 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Aox4Q3TYQ9 1336 aa16.25■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Ripply1Q2WG77 201 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Uri1Q3TLD5 531 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Slc4a8Q8JZR6 1089 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Appbp2Q9DAX9 585 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Usp54Q8BL06 1588 aaKnown RBP16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Erbb4Q61527 1308 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Kif1bQ60575 1816 aaKnown RBP16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Traf1P39428 409 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Catsper2A2ARP9 588 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Gbp4Q61107 620 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Nlrp9aQ66X03 949 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Pcdhb22Q91XZ8 794 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Rufy3Q9D394 469 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Eid1Q9DCR4 169 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Hs6st3Q9QYK4 470 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Yeats2Q3TUF7 1407 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Scaf11E9PZM7 1456 aaKnown RBP16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 RragbQ6NTA4 374 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Vps36Q91XD6 386 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Cabp5Q9JLK3 173 aa16.24■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Sun3Q5SS91 320 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 1700029H14RikE9PY36 240 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Pdia4P08003 638 aaKnown RBP16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Lmbrd2Q8C561 694 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Adgrl1Q80TR1 1466 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Mx1P09922 631 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Tom1l2Q5SRX1 507 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Nap1l4Q78ZA7 375 aaKnown RBP16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Tti2Q8BGV4 512 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Ctnnbl1Q9CWL8 563 aaKnown RBP16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 LdhaP06151 332 aaKnown RBP16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Usp25P57080 1055 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Zbtb38Q3LR78 1197 aa16.23■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Snx25Q3ZT31 840 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Syde2E9PUP1 1314 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Dcaf5Q80T85 946 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Gm30191A0A0U1RNT7 187 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Eif6O55135 245 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Nlrp2Q4PLS0 1046 aaKnown RBP16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Snx13Q6PHS6 957 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Nop53Q8BK35 484 aaKnown RBP16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Maats1Q8BRC6 783 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Fermt2Q8CIB5 680 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Ankrd23Q812A3 306 aa16.22■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Syt1P46096 421 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Sptlc2P97363 560 aaKnown RBP16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Ccdc93Q7TQK5 629 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Bst2Q8R2Q8 172 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Spocd1B1ASB6 936 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Mapkapk5O54992 473 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Zfp42P22227 288 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 MycbpapQ5SUV2 932 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Col20a1Q923P0 1320 aa16.21■□□□□ 0.19
Col2a1-202ENSMUST00000088355 Fermt1P59113 677 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Csrnp1P59054 583 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Jakmip3Q5DTN8 844 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 IqcgQ80W32 419 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Akr1c19G3X9Y6 323 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Gtpbp6Q3U6U5 514 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Pdzrn3Q69ZS0 1063 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Stac3Q8BZ71 360 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 9230110C19RikQ8CC70 267 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Abca16E9PWJ7 1678 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Kiaa1551Q5DTW7 1521 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Prr16A3KMN5 304 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Cfap73J3QPZ5 306 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Gm4758L7N258 96 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Rps8P62242 208 aaKnown RBP16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Eme2Q56A04 373 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Large2Q5XPT3 690 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Liat1Q810M6 228 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Ncaph2Q8BSP2 607 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Eif2ak4Q9QZ05 1648 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Abcc3B2RX12 1523 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 FancaQ9JL70 1439 aa16.2■□□□□ 0.18
Col2a1-202ENSMUST00000088355 Sycp2lA0A0M3U1B0 842 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms