RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Cdk13Q69ZA1 1511 aaKnown RBP10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tmem132aQ922P8 1018 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Nsd3Q6P2L6 1439 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Anp32cQ64G17 123 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Vps36Q91XD6 386 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tab2Q99K90 693 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Akap8Q9DBR0 687 aaKnown RBP10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Kcnn1Q9EQR3 537 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Eftud2O08810 971 aaKnown RBP10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Spa17Q62252 149 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Rps6kb1Q8BSK8 525 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gtpbp4Q99ME9 634 aaKnown RBP10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Mxra7Q9CZH7 178 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 PdiltQ9DAN1 588 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ccdc6D3YZP9 469 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Jade3Q6IE82 823 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Trak2Q6P9N8 913 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Rassf4Q8CB96 322 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Neurog2P70447 263 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Clcn1Q64347 994 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tsga10Q6NY15 697 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Wdr7Q920I9 1489 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Asxl2Q8BZ32 1370 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 ChkbO55229 394 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tex35Q14BK3 207 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tcerg1lQ3B807 590 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Snd1Q78PY7 910 aaKnown RBP10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Lmbrd2Q8C561 694 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ppp6r3Q922D4 844 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tnnc1P19123 161 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Mtx1P47802 317 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Vps54Q5SPW0 977 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Bicc1Q99MQ1 977 aaKnown RBP10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Cfap65Q3V0B4 1847 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 SsbP32067 415 aaKnown RBP10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Aifm3Q3TY86 605 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Wdr93Q402B2 695 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Kdm5bQ80Y84 1544 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ppp1r9aH3BJD6 1292 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Abtb2Q7TQI7 1024 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tsnaxip1Q99P25 704 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 TrdnE9Q9K5 693 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Sdad1Q80UZ2 687 aaKnown RBP10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Slc5a4bQ91ZP4 660 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tacc2Q9JJG0 1149 aa10.59□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tmem143Q8VD26 458 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Arhgef12Q8R4H2 1543 aaKnown RBP10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Zc3h12cQ5DTV4 884 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Znf428Q8C1M2 176 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ythdc2B2RR83 1445 aaKnown RBP10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Pola1P33609 1465 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 MycbpapQ5SUV2 932 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Smarcc2Q6PDG5 1213 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Tagap1P0CAX8 505 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 VimP20152 466 aaKnown RBP10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Fgfr1opQ66JX5 399 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Nek5Q7TSC3 627 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Kiaa1524Q8BWY9 907 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccdc186Q8C9S4 917 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Rapgef3Q8VCC8 918 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Stmn4P63042 189 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Hmgb1P63158 215 aaKnown RBP10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Nbr1P97432 988 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Exoc5Q3TPX4 708 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Znf697Q569E7 569 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gbp2Q9Z0E6 589 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 WizO88286 1684 aaKnown RBP10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Trappc8E9PWG2 1437 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Eef2P58252 858 aaKnown RBP10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Csrnp2Q8BGQ2 534 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Uba5Q8VE47 403 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Syce1Q9D495 329 aa10.58□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Mmp8O70138 465 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 AdnpQ9Z103 1108 aaKnown RBP10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Map7d1A2AJI0 846 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Myl6bQ8CI43 207 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Fam213aQ9CYH2 218 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccdc105Q9D4K7 499 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Letm1Q9Z2I0 738 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Btn2a2A4QPC6 514 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gm1993A6X8I0 212 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 SlxD3Z347 212 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 SlmapQ3URD3 845 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Rassf2Q8BMS9 326 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gimap5Q8BWF2 308 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gm5624F6ZZG8 207 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 GnaqP21279 359 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Eif3j1Q3UGC7 261 aaKnown RBP10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Pla2g4fQ50L41 855 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Eif3j2Q66JS6 263 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Kiaa1328Q6NZK5 612 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccdc57Q6PHN1 1016 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Rbm17Q8JZX4 405 aaKnown RBP10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Frat2Q8K025 231 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ttc5Q99LG4 440 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 DesP31001 469 aaKnown RBP10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Map3k7clP58500 142 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Mcm7Q61881 719 aaKnown RBP10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 9230110C19RikQ8CC70 267 aa10.57□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Fancd2Q80V62 1450 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms